RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ST8SIA4Q92187 359 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 SLC25A32Q9H2D1 315 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 MMACHCQ9Y4U1 282 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 GPR171O14626 319 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 XRCC2O43543 280 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 LRP3O75074 770 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 TBPP20226 339 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 HAAOP46952 286 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 GPM6AP51674 278 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 TFAP2EQ6VUC0 442 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 CA13Q8N1Q1 262 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 KIAA1456Q9P272 454 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 RCL1Q9Y2P8 373 aaKnown RBP17.87■□□□□ 0.45
SNX27-204ENST00000458013 SBK2P0C263 348 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 B4GALT1P15291 398 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 INSM1Q01101 510 aaPredicted RBP17.87■□□□□ 0.45
SNX27-204ENST00000458013 OR13C8Q8NGS7 320 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 STACQ99469 402 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 TMPRSS13Q9BYE2 586 aa17.87■□□□□ 0.45
SNX27-204ENST00000458013 C4orf47A7E2U8 309 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 APOBEC1P41238 236 aaKnown RBP17.86■□□□□ 0.45
SNX27-204ENST00000458013 EXT1Q16394 746 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 OLIG1Q8TAK6 271 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 CLEC5AQ9NY25 188 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 NRASP01111 189 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 ST6GAL1P15907 406 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 TM4SF4P48230 202 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 SYT6Q5T7P8 510 aaPredicted RBP17.86■□□□□ 0.45
SNX27-204ENST00000458013 PTRH1Q86Y79 214 aaKnown RBP17.86■□□□□ 0.45
SNX27-204ENST00000458013 VN1R2Q8NFZ6 395 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 PBOV1Q9GZY1 135 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 ANGPTL7O43827 346 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 TMEM267Q0VDI3 215 aaPredicted RBP17.86■□□□□ 0.45
SNX27-204ENST00000458013 SHHQ15465 462 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 TAF9Q16594 264 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 SLC25A35Q3KQZ1 300 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.86■□□□□ 0.45
SNX27-204ENST00000458013 C11orf40Q8WZ69 217 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 SLCO1C1Q9NYB5 712 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 ZNF230Q9UIE0 474 aaPredicted RBP17.86■□□□□ 0.45
SNX27-204ENST00000458013 FBXO4Q9UKT5 387 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 NUP98P52948 1817 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 CD3DP04234 171 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 MPPED2Q15777 294 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 KDF1Q8NAX2 398 aaPredicted RBP17.86■□□□□ 0.45
SNX27-204ENST00000458013 DTWD2Q8NBA8 298 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 OR10AD1Q8NGE0 317 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 OPALINQ96PE5 141 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 DAPP1Q9UN19 280 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 CRYBG1Q9Y4K1 1723 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 PIAS2O75928 621 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 C5orf46Q6UWT4 87 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 OR2AE1Q8NHA4 323 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 MRPS24Q96EL2 167 aaKnown RBP17.86■□□□□ 0.45
SNX27-204ENST00000458013 PSENENQ9NZ42 101 aa17.86■□□□□ 0.45
SNX27-204ENST00000458013 TMEM265A0A087WTH1 108 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 A0A1W2PPH5 198 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 H3BP45 60 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 TO15178 435 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 ZNF354AO60765 605 aaPredicted RBP17.85■□□□□ 0.45
SNX27-204ENST00000458013 DTYMKP23919 212 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 DDOSTP39656 456 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 GNG10P50151 68 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 BTNL8Q6UX41 500 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 GPR31O00270 319 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 EDIL3O43854 480 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 ETHE1O95571 254 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 ONECUT2O95948 504 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 NKAIN1Q4KMZ8 207 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 CDC20BQ86Y33 519 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 GLAP06280 429 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 SDHAP31040 664 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 ZNF85Q03923 595 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 ZNF77Q15935 545 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 LRRTM1Q86UE6 522 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 NXF2Q9GZY0 626 aaKnown RBP17.85■□□□□ 0.45
SNX27-204ENST00000458013 RYDENQ9NUL5 291 aaKnown RBP17.85■□□□□ 0.45
SNX27-204ENST00000458013 HMX2A2RU54 273 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 SHISA7A6NL88 538 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 KIR2DL3P43628 341 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 DOC2BQ14184 412 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 SLC24A4Q8NFF2 622 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 AKR7LQ8NHP1 331 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 GOLT1BQ9Y3E0 138 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 CD276Q5ZPR3 534 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 LHFPL2Q6ZUX7 228 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 DDX60Q8IY21 1712 aaKnown RBP17.85■□□□□ 0.45
SNX27-204ENST00000458013 OR13D1Q8NGV5 346 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 IKZF5Q9H5V7 419 aa17.85■□□□□ 0.45
SNX27-204ENST00000458013 FGF7P21781 194 aa17.84■□□□□ 0.45
SNX27-204ENST00000458013 CD27P26842 260 aa17.84■□□□□ 0.45
SNX27-204ENST00000458013 CLDN15P56746 228 aa17.84■□□□□ 0.45
SNX27-204ENST00000458013 RPUSD3Q6P087 351 aaKnown RBP17.84■□□□□ 0.45
SNX27-204ENST00000458013 PLXDC2Q6UX71 529 aa17.84■□□□□ 0.45
SNX27-204ENST00000458013 RPS19BP1Q86WX3 136 aaKnown RBP17.84■□□□□ 0.45
SNX27-204ENST00000458013 CCDC74BQ96LY2 380 aa17.84■□□□□ 0.45
SNX27-204ENST00000458013 SCN11AQ9UI33 1791 aa17.84■□□□□ 0.45
SNX27-204ENST00000458013 UBE2L5PA0A1B0GUS4 154 aa17.84■□□□□ 0.45
SNX27-204ENST00000458013 DEFB108AA8MXU0 73 aa17.84■□□□□ 0.45
SNX27-204ENST00000458013 GFERP55789 205 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms