RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 RAC2P15153 192 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF3P17036 446 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 GGT2P36268 569 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 RPS27P42677 84 aaKnown RBP13.76□□□□□ -0.21
CPSF6-203ENST00000456847 ERFP50548 548 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 CDK5R2Q13319 367 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 SLC7A6OSQ96CW6 309 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-203ENST00000456847 RAB39BQ96DA2 213 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 C1orf159Q96HA4 380 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 PDP1Q9P0J1 537 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-203ENST00000456847 ARRDC5A6NEK1 342 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 FAM157AC9JC47 383 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 GYPBP06028 91 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 SPARCP09486 303 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 PCMT1P22061 227 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 DVL1P1P54792 670 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-203ENST00000456847 OR2T2Q6IF00 324 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 LYPD4Q6UWN0 246 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF771Q7L3S4 317 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-203ENST00000456847 PEG10Q86TG7 708 aaKnown RBP13.76□□□□□ -0.21
CPSF6-203ENST00000456847 OR6K6Q8NGW6 343 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 OTULINQ96BN8 352 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 DDOQ99489 341 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF665Q9H7R5 613 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 WDR76Q9H967 626 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 TMEFF2Q9UIK5 374 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-203ENST00000456847 COMMD3-BMI1R4GMX3 469 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 DYSFO75923 2080 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 SURF4O15260 269 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 LCATP04180 440 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 ACSM4P0C7M7 580 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 TNFRSF1AP19438 455 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 FMO3P31513 532 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 TPTEP56180 551 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 CBX1P83916 185 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 SPRNQ5BIV9 151 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 FBXW12Q6X9E4 464 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 Q6ZR03 302 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 IQCF1Q8N6M8 205 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 ATG16L2Q8NAA4 619 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 OR51F2Q8NH61 342 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 ZNRF4Q8WWF5 429 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 SPTSSAQ969W0 71 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 MAP6Q96JE9 813 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 GAL3ST1Q99999 423 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 RBM4Q9BWF3 364 aaKnown RBP13.75□□□□□ -0.21
CPSF6-203ENST00000456847 HCAR1Q9BXC0 346 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF556Q9HAH1 456 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 POMPQ9Y244 141 aa13.75□□□□□ -0.21
CPSF6-203ENST00000456847 FKBP6O75344 327 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 MSMBP08118 114 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 SPI1P17947 270 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 POU1F1P28069 291 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 GRK5P34947 590 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 SRP14P37108 136 aaKnown RBP13.74□□□□□ -0.21
CPSF6-203ENST00000456847 SLC6A9P48067 706 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 ENTPD1P49961 510 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 SLC25A1P53007 311 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 MALLQ13021 153 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF362Q5T0B9 420 aaPredicted RBP13.74□□□□□ -0.21
CPSF6-203ENST00000456847 CD300LDQ6UXZ3 194 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 TMEM179BQ7Z7N9 219 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 BHLHE23Q8NDY6 225 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 ITLN1Q8WWA0 313 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF582Q96NG8 517 aaPredicted RBP13.74□□□□□ -0.21
CPSF6-203ENST00000456847 PNRC2Q9NPJ4 139 aaKnown RBP13.74□□□□□ -0.21
CPSF6-203ENST00000456847 M0R135 149 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 CLUP10909 449 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 LMO4P61968 165 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 TAF13Q15543 124 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 DCXRQ7Z4W1 244 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF511Q8NB15 262 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 TMEM186Q96B77 213 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 ZNF799Q96GE5 643 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 MDFIQ99750 246 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 COPS4Q9BT78 406 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 C1QTNF5Q9BXJ0 243 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 CMC2Q9NRP2 79 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 HIF1ANQ9NWT6 349 aa13.74□□□□□ -0.21
CPSF6-203ENST00000456847 ANPEPP15144 967 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 SELEP16581 610 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 RSPO1Q2MKA7 263 aaPredicted RBP13.73□□□□□ -0.21
CPSF6-203ENST00000456847 KRTAP27-1Q3LI81 207 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 OR8G5Q8NG78 346 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 OR10AD1Q8NGE0 317 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 OR2V2Q96R30 315 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 NMNAT2Q9BZQ4 307 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 TMEM106BQ9NUM4 274 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 UBAP1Q9NZ09 502 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 DNAJB9Q9UBS3 223 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 IL19Q9UHD0 177 aa13.73□□□□□ -0.21
CPSF6-203ENST00000456847 TCRBV3S1A0A5B6 114 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 FAM183AA6NL82 134 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 PAICSP22234 425 aaKnown RBP13.72□□□□□ -0.21
CPSF6-203ENST00000456847 BLVRAP53004 296 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 PRSS12P56730 875 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 BNIP1Q12981 228 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 ACSM5Q6NUN0 579 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 SLC27A4Q6P1M0 643 aa13.72□□□□□ -0.21
CPSF6-203ENST00000456847 MRPL21Q7Z2W9 205 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms