RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CELA2AP08217 269 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 AVPR2P30518 371 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 FAUP35544 74 aaKnown RBP11.08□□□□□ -0.64
LINC00959-201ENST00000456581 EMP2P54851 167 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 OR7A5Q15622 319 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 ATPAF1Q5TC12 328 aaPredicted RBP11.08□□□□□ -0.64
LINC00959-201ENST00000456581 TMEM225Q6GV28 225 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 C3orf33Q6P1S2 294 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 WDR5BQ86VZ2 330 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 SPSB2Q99619 263 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 SLC6A7Q99884 636 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 TMEM231Q9H6L2 316 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 LDAHQ9H6V9 325 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 EMC9Q9Y3B6 208 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 LOC100289279A0A1B0GTE1 492 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 HMSDA8MTL9 139 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 BET1O15155 118 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 LDOC1O95751 146 aaPredicted RBP11.08□□□□□ -0.64
LINC00959-201ENST00000456581 RENP00797 406 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 GP1BBP13224 206 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 MNDAP41218 407 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 EIF1AXP47813 144 aaKnown RBP11.08□□□□□ -0.64
LINC00959-201ENST00000456581 PNLIPRP2P54317 469 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 ATP1B3P54709 279 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 FOXK1P85037 733 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 SLC17A1Q14916 467 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 GUCA2BQ16661 112 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 CCDC157Q569K6 752 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 ZNF385CQ66K41 422 aaPredicted RBP11.08□□□□□ -0.64
LINC00959-201ENST00000456581 RABEPKQ7Z6M1 372 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 PPP1R3BQ86XI6 285 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 BEST3Q8N1M1 668 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 METTL21AQ8WXB1 218 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 ROBO4Q8WZ75 1007 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 SPACA5Q96QH8 159 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 CRB3Q9BUF7 120 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 SUSD2Q9UGT4 822 aa11.08□□□□□ -0.64
LINC00959-201ENST00000456581 IGLV3-12A0A075B6K2 115 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 SLC25A12O75746 678 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 RPL35P42766 123 aaKnown RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 NUBP1P53384 320 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 CLDN6P56747 220 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 DHRS2Q13268 280 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 CBLN2Q8IUK8 224 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 C1orf210Q8IVY1 113 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 CASTOR1Q8WTX7 329 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 ASB5Q8WWX0 329 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 ARL5BQ96KC2 179 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 OR8B4Q96RC9 309 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 TGIF2Q9GZN2 237 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 BARX1Q9HBU1 254 aaPredicted RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 PRMT8Q9NR22 394 aaPredicted RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 DHDHQ9UQ10 334 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 NOP16Q9Y3C1 178 aaKnown RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 CNOT1A5YKK6 2376 aaKnown RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 TMED7-TICAM2A0A0A6YYA0 188 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 OR5H14A6NHG9 310 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 SLC17A2O00624 439 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 XKRYO14609 159 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 OR6A2O95222 327 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 HLA-AP01891 365 aaKnown RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 BGLAPP02818 100 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 PGCP20142 388 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 C4BPBP20851 252 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 SLC6A8P48029 635 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 CAPZA1P52907 286 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 EIF2B1Q14232 305 aaKnown RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 HDDC2Q7Z4H3 204 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 KRT77Q7Z794 578 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 C12orf45Q8N5I9 185 aaPredicted RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 OR4D6Q8NGJ1 314 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 OR13C8Q8NGS7 320 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 GPX8Q8TED1 209 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 NUDCD2Q8WVJ2 157 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 SLC25A44Q96H78 314 aaPredicted RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 PDCD10Q9BUL8 212 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 RABL2AQ9UBK7 228 aaPredicted RBP11.07□□□□□ -0.64
LINC00959-201ENST00000456581 VSIG4Q9Y279 399 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 TMED7Q9Y3B3 224 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 LRP12Q9Y561 859 aa11.07□□□□□ -0.64
LINC00959-201ENST00000456581 IGKV1D-43A0A0B4J1Z2 117 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 CCDC163A0A0D9SF12 145 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 TOX3O15405 576 aaPredicted RBP11.06□□□□□ -0.64
LINC00959-201ENST00000456581 EIF4E2O60573 245 aaKnown RBP11.06□□□□□ -0.64
LINC00959-201ENST00000456581 ITGB2P05107 769 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 HOXA6P31267 233 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 BPIFB2Q8N4F0 458 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 MRGPRFQ96AM1 343 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 TAS2R3Q9NYW6 316 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 COA3Q9Y2R0 106 aaPredicted RBP11.06□□□□□ -0.64
LINC00959-201ENST00000456581 OR2J2O76002 312 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 PNLIPP16233 465 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 ANOS1P23352 680 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 HTR2CP28335 458 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 ZNF169Q14929 603 aaPredicted RBP11.06□□□□□ -0.64
LINC00959-201ENST00000456581 ISXQ2M1V0 245 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 KCTD9Q7L273 389 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 TMEM185AQ8NFB2 350 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms