RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SLC6A15Q9H2J7 730 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 TMEM138Q9NPI0 162 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 CENPMQ9NSP4 180 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 FAIMQ9NVQ4 179 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 CLCF1Q9UBD9 225 aa6.02□□□□□ -1.45
ECHDC1-210ENST00000454859 ZNF292O60281 2723 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 EP300Q09472 2414 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 PHF3Q92576 2039 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 ARHGAP21Q5T5U3 1957 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 LOC107986453A0A1B0GWG9 222 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 SHISA3A0PJX4 238 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM166BA8MTA8 275 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 MASP2O00187 686 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 SULT1C2O00338 296 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 XRCC2O43543 280 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 SYT7O43581 403 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 SYNGR3O43761 229 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 WDR1O75083 606 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 MPZL1O95297 269 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 ECDO95905 644 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 PNPP00491 289 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 TTRP02766 147 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 ACSM4P0C7M7 580 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 MPGP29372 298 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 ALDH3B1P43353 468 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 ART1P52961 327 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 AP3S2P59780 193 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 ARL6IP1Q15041 203 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 GUSBP1Q15486 140 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 C3orf36Q3SXR2 165 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 ANKRD16Q6P6B7 361 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 CNIH2Q6PI25 160 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 CFAP77Q6ZQR2 320 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 PRSS45Q7RTY3 260 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 OR2W3Q7Z3T1 314 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM169BQ8N8A8 192 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 ZNF671Q8TAW3 534 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 SMAP2Q8WU79 429 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 CHAC2Q8WUX2 184 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 AKAP1Q92667 903 aaKnown RBP eCLIP6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 PPIL3Q9H2H8 161 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 PLEKHA1Q9HB21 404 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 CRLF2Q9HC73 371 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 COPZ2Q9P299 210 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 COMMD3Q9UBI1 195 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 DAPK2Q9UIK4 370 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 V9GYS6 101 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 WDR87Q6ZQQ6 2873 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 CACNA1GO43497 2377 aa6.01□□□□□ -1.45
ECHDC1-210ENST00000454859 LOC100289279A0A1B0GTE1 492 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 A6NL46 340 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 PRSS44E7EML9 344 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 KLK10O43240 276 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 ICMTO60725 284 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 GSTT2BP0CG30 244 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 PSKH1P11801 424 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 GNALP38405 381 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 CX3CR1P49238 355 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 STARP49675 285 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 RAB11BQ15907 218 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 CARD17Q5XLA6 110 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 FBXW9Q5XUX1 488 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 UNQ6126/PRO20091Q6UXV3 157 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 LRRC69Q6ZNQ3 347 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 LINGO2Q7L985 606 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 LUZP2Q86TE4 346 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 LINC00346Q8IVM7 164 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 UBQLNLQ8IYU4 475 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 C17orf78Q8N4C9 275 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 C19orf18Q8NEA5 215 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 OR6K3Q8NGY3 331 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 ROBO4Q8WZ75 1007 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 HSD17B8Q92506 261 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 HAVCR1Q96D42 359 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 SLC22A4Q9H015 551 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 METTL17Q9H7H0 456 aaPredicted RBP6□□□□□ -1.45
ECHDC1-210ENST00000454859 EMC7Q9NPA0 242 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 PCDHB16Q9NRJ7 776 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 TAS2R8Q9NYW2 309 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 NPAP1Q9NZP6 1156 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 UPB1Q9UBR1 384 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 IGHV3-15A0A0B4J1V0 119 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 A0A1B0GTI1 187 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 NAP1L6A6NFF2 107 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM25AB3EWG3 89 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM25CB3EWG5 89 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM25GB3EWG6 89 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 H3BUI4 141 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 J3QRK9 145 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 K7ENP7 123 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 M0R135 149 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 MAGEB3O15480 346 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 TPD52L2O43399 206 aaKnown RBP6□□□□□ -1.45
ECHDC1-210ENST00000454859 HPGDSO60760 199 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 DHRS3O75911 302 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 OPN1LWP04000 364 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 TPOP07202 933 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 OCMP0CE72 109 aaPredicted RBP6□□□□□ -1.45
ECHDC1-210ENST00000454859 ZNF20P17024 532 aa6□□□□□ -1.45
ECHDC1-210ENST00000454859 ATF1P18846 271 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms