RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PLEK2Q9NYT0 353 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 SLC22A13Q9Y226 551 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 TIMM10BQ9Y5J6 103 aa9.55□□□□□ -0.88
SCN9A-205ENST00000454569 UBR5O95071 2799 aaPredicted RBP9.55□□□□□ -0.88
SCN9A-205ENST00000454569 OR6C6A6NF89 314 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 H3BSH0 61 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SULT1C4O75897 302 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 FARS2O95363 451 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 MT-ND5P03915 603 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 RPLP1P05386 114 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 H2BFMP0C1H6 154 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 PSMB1P20618 241 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 NR4A1P22736 598 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 CRYGSP22914 178 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 CHRNB4P30926 498 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 TMBIM6P55061 237 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SH3BGRP55822 239 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ODF4Q2M2E3 257 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 KRTAP27-1Q3LI81 207 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 LIPKQ5VXJ0 399 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SEZ6L2Q6UXD5 910 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 TMPRSS11AQ6ZMR5 421 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SYT9Q86SS6 491 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 PAQR4Q8N4S7 273 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 IL17RDQ8NFM7 739 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 OR1F12Q8NHA8 337 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 RAB2BQ8WUD1 216 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ASB17Q8WXJ9 295 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 C12orf43Q96C57 262 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 YIPF6Q96EC8 236 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 TRMT61AQ96FX7 289 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SOX7Q9BT81 388 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 G6PC2Q9NQR9 355 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 DDX28Q9NUL7 540 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 FRRS1LQ9P0K9 344 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ENPP5Q9UJA9 477 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SF3B6Q9Y3B4 125 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ROS1P08922 2347 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 PLCE1Q9P212 2302 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 A0A1B0GUH1 482 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 OR5H1A6NKK0 313 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF878C9JN71 531 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 F5H5K5 113 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 H3BMQ9 156 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 PHYHO14832 338 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 OGG1O15527 345 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 KRT8P05787 483 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF14P17017 642 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 CELP19835 753 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 UGT2B10P36537 528 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 TGFBR1P36897 503 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ACTA2P62736 377 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 RPS25P62851 125 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ACTG2P63267 376 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SRSF1Q07955 248 aaKnown RBP eCLIP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ACSM1Q08AH1 577 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 MLLT11Q13015 90 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 TPBGQ13641 420 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 RAB35Q15286 201 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 TAB1Q15750 504 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 GSG1Q2KHT4 349 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SLC36A2Q495M3 483 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ARSJQ5FYB0 599 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 WDR38Q5JTN6 314 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 DMKNQ6E0U4 476 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 KCTD18Q6PI47 426 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 PRSS45Q7RTY3 260 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 P2RY8Q86VZ1 359 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ANKRD13BQ86YJ7 626 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 PHC2Q8IXK0 858 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 RDH10Q8IZV5 341 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 OR13C5Q8NGS8 318 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 OR10AC1Q8NH08 325 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 LILRB4Q8NHJ6 448 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ITLN2Q8WWU7 325 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 RGP1Q92546 391 aaPredicted RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 RPL3LQ92901 407 aaKnown RBP9.54□□□□□ -0.88
SCN9A-205ENST00000454569 PGLYRP3Q96LB9 341 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 DOK1Q99704 481 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ATF6BQ99941 703 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 PDCD1LG2Q9BQ51 273 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 MROQ9BYG7 248 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 FAM206AQ9NX38 181 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 NPAP1Q9NZP6 1156 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 N6AMT1Q9Y5N5 214 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 SLC25A15Q9Y619 301 aa9.54□□□□□ -0.88
SCN9A-205ENST00000454569 ARPC4-TTLL3A0A0A6YYG9 625 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 THBDP07204 575 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 CD36P16671 472 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 CPEP16870 476 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 IL32P24001 234 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 OTX1P32242 354 aaPredicted RBP9.53□□□□□ -0.88
SCN9A-205ENST00000454569 HTR5AP47898 357 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 RGS6P49758 472 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 RIDAP52758 137 aaKnown RBP9.53□□□□□ -0.88
SCN9A-205ENST00000454569 GBX2P52951 348 aaPredicted RBP9.53□□□□□ -0.88
SCN9A-205ENST00000454569 TGFBR3Q03167 851 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 TFF3Q07654 80 aa9.53□□□□□ -0.88
SCN9A-205ENST00000454569 SLC3A1Q07837 685 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms