RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 A0A1B0GWJ7 208 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 B2RBV5 119 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 J3QLI3 93 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 TNFRSF11BO00300 401 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 MLNRO43193 412 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 ACSM4P0C7M7 580 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 MMP16P51512 607 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.51□□□□□ -0.73
CPSF4-208ENST00000452047 ZMYND11Q15326 602 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 SLC36A3Q495N2 470 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 TMEM155Q4W5P6 130 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 ZNF362Q5T0B9 420 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-208ENST00000452047 DCAF12L2Q5VW00 463 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 OR2T2Q6IF00 324 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 RPL13AP3Q6NVV1 102 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 C1QL2Q7Z5L3 287 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 ARHGAP24Q8N264 748 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 LINC00471Q8N535 108 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 OR8G5Q8NG78 346 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 OR10AD1Q8NGE0 317 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 OR52L1Q8NGH7 329 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 MAP6Q96JE9 813 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 PITX2Q99697 317 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 ATF6BQ99941 703 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 MUC13Q9H3R2 512 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 MAGIXQ9H6Y5 334 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 GCM1Q9NP62 436 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 VNN3Q9NY84 501 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 PPP1R3CQ9UQK1 317 aa10.51□□□□□ -0.73
CPSF4-208ENST00000452047 PPIAL4EA0A075B759 164 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 PPIAL4CA0A0B4J2A2 164 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 IQCF6A8MYZ5 107 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 PPIAL4DF5H284 164 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 SURF4O15260 269 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 VENTXO95231 258 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 FSHBP01225 129 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 GASTP01350 101 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 PPIAL4FP0DN26 164 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 T-ENOLP0DO92 83 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 PSKH1P11801 424 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 EPHA1P21709 976 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 GATA3P23771 443 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 ZFP36P26651 326 aaKnown RBP10.5□□□□□ -0.73
CPSF4-208ENST00000452047 PYCR1P32322 319 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 BTG1P62324 171 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 LCN2P80188 198 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 MS4A2Q01362 244 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 TRAP1Q12931 704 aaKnown RBP10.5□□□□□ -0.73
CPSF4-208ENST00000452047 PPP1R8Q12972 351 aaKnown RBP10.5□□□□□ -0.73
CPSF4-208ENST00000452047 ECH1Q13011 328 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 SCGB2A2Q13296 93 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 RASSF6Q6ZTQ3 369 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 LRRC28Q86X40 367 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-208ENST00000452047 SPICQ8N5J4 248 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 TEX29Q8N6K0 151 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 CYB561A3Q8NBI2 242 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 OR10S1Q8NGN2 331 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 OR13G1Q8NGZ3 307 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 ZNRF4Q8WWF5 429 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 NSL1Q96IY1 281 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 MEGF10Q96KG7 1140 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 SLC30A2Q9BRI3 323 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 OCEL1Q9H607 264 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 WDR76Q9H967 626 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 PATZ1Q9HBE1 687 aaKnown RBP10.5□□□□□ -0.73
CPSF4-208ENST00000452047 OPN4Q9UHM6 478 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 KCNG2Q9UJ96 466 aa10.5□□□□□ -0.73
CPSF4-208ENST00000452047 POLR3KQ9Y2Y1 108 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-208ENST00000452047 F5H0A9 414 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 F5H5K5 113 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 H0YL77 283 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 TMEM178BH3BS89 294 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 CCNB2O95067 398 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 FAM107AO95990 144 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 HLA-DQA2P01906 255 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 SBK2P0C263 348 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 ADRA2CP18825 462 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 CALB2P22676 271 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 ANOS1P23352 680 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 OTX1P32242 354 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 RPS27P42677 84 aaKnown RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 PRSS12P56730 875 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 SEC61A1P61619 476 aaKnown RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 TRIM25Q14258 630 aaKnown RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 GK2Q14410 553 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 SLC27A4Q6P1M0 643 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 LYPD4Q6UWN0 246 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 NAA40Q86UY6 237 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 DHFR2Q86XF0 187 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 LNX2Q8N448 690 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 KLHL36Q8N4N3 616 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 ATG16L2Q8NAA4 619 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 AQP11Q8NBQ7 271 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 BHLHE23Q8NDY6 225 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 OR2AJ1Q8NGZ0 328 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 OR2T4Q8NH00 348 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 ST7LQ8TDW4 575 aa10.49□□□□□ -0.73
CPSF4-208ENST00000452047 ZNF582Q96NG8 517 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 RBM4Q9BWF3 364 aaKnown RBP10.49□□□□□ -0.73
CPSF4-208ENST00000452047 CDADC1Q9BWV3 514 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms