RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 HIST1H1CP16403 213 aaKnown RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 FCARP24071 287 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 AK4P27144 223 aaPredicted RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 CFPP27918 469 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 PBLDP30039 288 aaPredicted RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 DIO1P49895 249 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 CLDN2P57739 230 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 FAM110CQ1W6H9 321 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 LRRC73Q5JTD7 316 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 FAM220AQ7Z4H9 259 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 C17orf64Q86WR6 236 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 DCAF4L2Q8NA75 395 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 SUMF2Q8NBJ7 301 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 OR6K6Q8NGW6 343 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 ABHD5Q8WTS1 349 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 FRZBQ92765 325 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 SCAMP4Q969E2 229 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 ZMAT3Q9HA38 289 aaKnown RBP7.75□□□□□ -1.17
LSM5-208ENST00000450169 FRRS1LQ9P0K9 344 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 MED31Q9Y3C7 131 aa7.75□□□□□ -1.17
LSM5-208ENST00000450169 A0A087WV62 115 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 A0A087WWC5 75 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 TRBV5-7A0A0A0MS05 114 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 A0A1B0GVT2 93 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 TBL1XO60907 577 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 JTBO76095 146 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 SLC35G4P0C7Q5 338 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 IRF1P10914 325 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 TAGLN2P37802 199 aaKnown RBP7.74□□□□□ -1.17
LSM5-208ENST00000450169 NPY4RP50391 375 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 AFF3P51826 1226 aaKnown RBP7.74□□□□□ -1.17
LSM5-208ENST00000450169 FKBP1BP68106 108 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 FAM129CQ86XR2 697 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 ZNRF4Q8WWF5 429 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 RELTQ969Z4 430 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 THOC3Q96J01 351 aaKnown RBP7.74□□□□□ -1.17
LSM5-208ENST00000450169 ADGRG7Q96K78 797 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 SNX22Q96L94 193 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 TNFRSF13CQ96RJ3 184 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 GAL3ST4Q96RP7 486 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 G6PC3Q9BUM1 346 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 CBLN4Q9NTU7 201 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 SERTAD3Q9UJW9 196 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 PITPNC1Q9UKF7 332 aa7.74□□□□□ -1.17
LSM5-208ENST00000450169 A6NNC1 897 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 H3BSH0 61 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 SLC17A2O00624 439 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 TP53I11O14683 189 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 DOK2O60496 412 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 DFFBO76075 338 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 GAPDHP04406 335 aaKnown RBP7.73□□□□□ -1.17
LSM5-208ENST00000450169 TACSTD2P09758 323 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 FAM3AP98173 230 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 RAB32Q13637 225 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 OR1Q1Q15612 314 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 PRAMEF14Q5SWL7 426 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 ZNF684Q5T5D7 378 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 LEG1Q6P5S2 330 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 MED25Q71SY5 747 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 MTSS1LQ765P7 747 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 FAM219AQ8IW50 185 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 ZNF101Q8IZC7 436 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 TRAM1L1Q8N609 369 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 ZNF283Q8N7M2 679 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 TMEM104Q8NE00 496 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 OR9A1PQ8NGU1 263 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 MFSD8Q8NHS3 518 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 RAB39BQ96DA2 213 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 LMF1Q96S06 567 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 FAM83CQ9BQN1 747 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 DPEP2Q9H4A9 486 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 RAB18Q9NP72 206 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 LUZP4Q9P127 313 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 USP36Q9P275 1121 aaKnown RBP7.73□□□□□ -1.17
LSM5-208ENST00000450169 COL4A3Q01955 1670 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 NUP210LQ5VU65 1888 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 A0A0G2JN53 185 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 C1QTNF3-AMACRE9PGA6 284 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 H3BQ15 152 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 M0QZK8 103 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 NDUFS4O43181 175 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 GGCTO75223 188 aaKnown RBP7.73□□□□□ -1.17
LSM5-208ENST00000450169 LEFTY1O75610 366 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 UPK3AO75631 287 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 LYPD3O95274 346 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 BPNT1O95861 308 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 AMBPP02760 352 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 CKMP06732 381 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 ELFN1P0C7U0 828 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 GABRR1P24046 479 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 THBS4P35443 961 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 CAMLGP49069 296 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 TAS2R31P59538 309 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 S100A10P60903 97 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 EIPR1Q53HC9 387 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 TM4SF20Q53R12 229 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 RPUSD3Q6P087 351 aaKnown RBP7.73□□□□□ -1.17
LSM5-208ENST00000450169 TMEM183AQ8IXX5 376 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 ZNF676Q8N7Q3 588 aa7.73□□□□□ -1.17
LSM5-208ENST00000450169 AMER3Q8N944 861 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms