RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 MED9Q9NWA0 146 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 FXNQ16595 210 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 TIPARPQ7Z3E1 657 aaKnown RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 ARRDC1Q8N5I2 433 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 FBXW5Q969U6 566 aa12.68□□□□□ -0.38
ITGB4-202ENST00000449880 C19orf53Q9UNZ5 99 aaPredicted RBP12.68□□□□□ -0.38
ITGB4-202ENST00000449880 TMED7-TICAM2A0A0A6YYA0 188 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 A8MVM7 634 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 M0QZK8 103 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 GGCTO75223 188 aaKnown RBP12.67□□□□□ -0.38
ITGB4-202ENST00000449880 ABHD16AO95870 558 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 GABRA2P47869 451 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 CSNK1EP49674 416 aaKnown RBP12.67□□□□□ -0.38
ITGB4-202ENST00000449880 CSNK1G2P78368 415 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 SLC35A1P78382 337 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 ARHGEF39Q8N4T4 335 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 ASH2LQ9UBL3 628 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 TMED7Q9Y3B3 224 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 PCDHGA1Q9Y5H4 931 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 LOC107986453A0A1B0GWG9 222 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 H7C1C5 153 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 PYCARD-AS1I3L0S3 204 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 EN2P19622 333 aaPredicted RBP12.67□□□□□ -0.38
ITGB4-202ENST00000449880 TCN2P20062 427 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 ALOX5APP20292 161 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 HTR5AP47898 357 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 CDK5Q00535 292 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 C2orf76Q3KRA6 126 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF385BQ569K4 471 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 TMEM128Q5BJH2 165 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 NCR3LG1Q68D85 454 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 OR4N2Q8NGD1 307 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 GPR137Q96N19 417 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 OPN1LWP04000 364 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 EPHA2P29317 976 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 TESK1Q15569 626 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 MRM1Q6IN84 353 aaKnown RBP12.67□□□□□ -0.38
ITGB4-202ENST00000449880 TMEM217Q8N7C4 229 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 TMEM178AQ8NBL3 297 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 NTNG2Q96CW9 530 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 CDC14CA4D256 554 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 PLPP2O43688 288 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 OR7C1O76099 320 aaPredicted RBP12.67□□□□□ -0.38
ITGB4-202ENST00000449880 PTGER1P34995 402 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 MFAP5Q13361 173 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 C8orf82Q6P1X6 216 aaPredicted RBP12.67□□□□□ -0.38
ITGB4-202ENST00000449880 BHLHA9Q7RTU4 235 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 CATSPERDQ86XM0 798 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 LINC00052Q96N35 136 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 JAM3Q9BX67 310 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 RAB18Q9NP72 206 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 CGGBP1Q9UFW8 167 aaPredicted RBP12.67□□□□□ -0.38
ITGB4-202ENST00000449880 URB1O60287 2271 aaKnown RBP12.67□□□□□ -0.38
ITGB4-202ENST00000449880 KIAA1217Q5T5P2 1943 aa12.67□□□□□ -0.38
ITGB4-202ENST00000449880 CROCCQ5TZA2 2017 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 PHOX2AO14813 284 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 HMGA2P52926 109 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 CD300CQ08708 224 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 FABP9Q0Z7S8 132 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 MLF2Q15773 248 aaPredicted RBP12.66□□□□□ -0.38
ITGB4-202ENST00000449880 HAGHQ16775 308 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF787Q6DD87 383 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 AKR1E2Q96JD6 320 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 SEC11CQ9BY50 192 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 ACTR3CQ9C0K3 210 aaPredicted RBP12.66□□□□□ -0.38
ITGB4-202ENST00000449880 MMACHCQ9Y4U1 282 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 UTS2O95399 124 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 TLE1Q04724 770 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 GUK1Q16774 197 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 TMEM52BQ4KMG9 183 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 PLXDC2Q6UX71 529 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 LMNTD1Q8N9Z9 388 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 UBAC2Q8NBM4 344 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 SLC35A4Q96G79 324 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 NXF2Q9GZY0 626 aaKnown RBP12.66□□□□□ -0.38
ITGB4-202ENST00000449880 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
ITGB4-202ENST00000449880 IRS1P35568 1242 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 ERV3-1Q14264 604 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 SLC25A35Q3KQZ1 300 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 Q6ZNB5 142 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 SLC38A9Q8NBW4 561 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 ZNF275Q9NSD4 429 aaPredicted RBP12.66□□□□□ -0.38
ITGB4-202ENST00000449880 FKBP2P26885 142 aaKnown RBP12.66□□□□□ -0.38
ITGB4-202ENST00000449880 CDONQ4KMG0 1287 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 C19orf35Q6ZS72 473 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 DND1Q8IYX4 353 aaKnown RBP12.66□□□□□ -0.38
ITGB4-202ENST00000449880 GPR119Q8TDV5 335 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 PTDSS2Q9BVG9 487 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 TEX101Q9BY14 249 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 SLC35D1Q9NTN3 355 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 CACFD1Q9UGQ2 172 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 hCG_1809904A0A1W2PP81 198 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 A0A1W2PPE2 198 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 A0A1W2PR64 198 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 A0A1W2PRV1 198 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 FITM1A5D6W6 292 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 SULT1A3P0DMM9 295 aa12.66□□□□□ -0.38
ITGB4-202ENST00000449880 SULT1A4P0DMN0 295 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms