RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GASTP01350 101 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 DBPQ10586 325 aaPredicted RBP12.91□□□□□ -0.34
CHD3-205ENST00000449744 PPP1R8Q12972 351 aaKnown RBP12.91□□□□□ -0.34
CHD3-205ENST00000449744 DCAF12L2Q5VW00 463 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 OR2T5Q6IEZ7 315 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 CFAP77Q6ZQR2 320 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 CYB561A3Q8NBI2 242 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 OR8G5Q8NG78 346 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 OR4C15Q8NGM1 316 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 OR13G1Q8NGZ3 307 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 OR2T4Q8NH00 348 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 OR2T29Q8NH02 315 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 ITLN1Q8WWA0 313 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 OR2V2Q96R30 315 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 ATF6BQ99941 703 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 G6PC2Q9NQR9 355 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 IL20Q9NYY1 176 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 CYB5R1Q9UHQ9 305 aa12.91□□□□□ -0.34
CHD3-205ENST00000449744 PRPF19Q9UMS4 504 aaKnown RBP12.91□□□□□ -0.34
CHD3-205ENST00000449744 SAMHD1Q9Y3Z3 626 aaKnown RBP12.91□□□□□ -0.34
CHD3-205ENST00000449744 BHLHE40O14503 412 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 LCATP04180 440 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 SELEP16581 610 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 PYCR1P32322 319 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 GGT2P36268 569 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 TPTEP56180 551 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 MS4A2Q01362 244 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 MALLQ13021 153 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 KLHL36Q8N4N3 616 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 SPICQ8N5J4 248 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 ZNF283Q8N7M2 679 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 TSSK6Q9BXA6 273 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 C1QTNF5Q9BXJ0 243 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 PLA2G12AQ9BZM1 189 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 WDR76Q9H967 626 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 DCAF16Q9NXF7 216 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 U3KQV3 271 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 TANC2Q9HCD6 1990 aa12.9□□□□□ -0.34
CHD3-205ENST00000449744 MXRA5Q9NR99 2828 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 TVP23AA6NH52 213 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 J3QLI3 93 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 IFNL4K9M1U5 179 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 FOXH1O75593 365 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 IGHV2-70P01814 119 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 ACSM4P0C7M7 580 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 GATA3P23771 443 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 SRP9P49458 86 aaKnown RBP12.89□□□□□ -0.35
CHD3-205ENST00000449744 BTG1P62324 171 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 LCN2P80188 198 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 TRAP1Q12931 704 aaKnown RBP12.89□□□□□ -0.35
CHD3-205ENST00000449744 MICAQ29983 383 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 RSPO1Q2MKA7 263 aaPredicted RBP12.89□□□□□ -0.35
CHD3-205ENST00000449744 ZNF770Q6IQ21 691 aaPredicted RBP12.89□□□□□ -0.35
CHD3-205ENST00000449744 COLCA1Q6ZS62 124 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 SLC37A3Q8NCC5 494 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 BHLHE23Q8NDY6 225 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 OR10AD1Q8NGE0 317 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 OR8D4Q8NGM9 314 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 SPTSSAQ969W0 71 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 CCDC124Q96CT7 223 aaKnown RBP12.89□□□□□ -0.35
CHD3-205ENST00000449744 ASB9Q96DX5 294 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 TMEM100Q9NV29 134 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 MRPL22Q9NWU5 206 aaKnown RBP12.89□□□□□ -0.35
CHD3-205ENST00000449744 BAIAP2Q9UQB8 552 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 DYSFO75923 2080 aa12.89□□□□□ -0.35
CHD3-205ENST00000449744 LOC105371242A0A075B767 164 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 A0A0A6YYJ9 748 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 IQCF6A8MYZ5 107 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 M0R135 149 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 DYNC1I1O14576 645 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 SOX14O95416 240 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 T-ENOLP0DO92 83 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 RAP2AP10114 183 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 FMO3P31513 532 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 HNRNPA0Q13151 305 aaKnown RBP12.88□□□□□ -0.35
CHD3-205ENST00000449744 KRTAP27-1Q3LI81 207 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 TMEM155Q4W5P6 130 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 LNX2Q8N448 690 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 OR2T33Q8NG76 320 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 OR51L1Q8NGJ5 315 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 OR9Q1Q8NGQ5 310 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 ZNF418Q8TF45 676 aaPredicted RBP12.88□□□□□ -0.35
CHD3-205ENST00000449744 ZNF799Q96GE5 643 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 MAP6Q96JE9 813 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 MEGF10Q96KG7 1140 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 DDOQ99489 341 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 SLC30A2Q9BRI3 323 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 THTPAQ9BU02 230 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 DGCR6LQ9BY27 220 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 TMPRSS13Q9BYE2 586 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 C1orf21Q9H246 121 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 PNRC2Q9NPJ4 139 aaKnown RBP12.88□□□□□ -0.35
CHD3-205ENST00000449744 VNN3Q9NY84 501 aa12.88□□□□□ -0.35
CHD3-205ENST00000449744 H0YL77 283 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 TMEM178BH3BS89 294 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 AVPP01185 164 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 IFNGP01579 166 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 SPARCP09486 303 aa12.87□□□□□ -0.35
CHD3-205ENST00000449744 RPS27P42677 84 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms