RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 PPIAP62937 165 aaKnown RBP9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 STK11Q15831 433 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 ATP1A1-AS1Q5TC04 95 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 FAM27BQ5VT28 67 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 CCBE1Q6UXH8 406 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 GDPD3Q7L5L3 318 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 CHMP1BQ7LBR1 199 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF554Q86TJ5 538 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 VASH2Q86V25 355 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 NKAIN3Q8N8D7 197 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 CCDC54Q8NEL0 328 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 OR51A4Q8NGJ6 313 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 OR10S1Q8NGN2 331 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 OR5H6Q8NGV6 325 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 ROBO4Q8WZ75 1007 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 RFT1Q96AA3 541 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 FOXRED1Q96CU9 486 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 S100A16Q96FQ6 103 aaKnown RBP9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 GFI1Q99684 422 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF416Q9BWM5 594 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 PBOV1Q9GZY1 135 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 ABCG5Q9H222 651 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF552Q9H707 407 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 RNF122Q9H9V4 155 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 DDX28Q9NUL7 540 aaKnown RBP9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 PCDHGA9Q9Y5G4 932 aaKnown RBP9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 TRAV8-7A0A075B6U6 113 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A0G2JMP0 313 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A0X1KG70 313 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 CTDSPLO15194 276 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 NKX2-8O15522 239 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 SYT7O43581 403 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 SULT1B1O43704 296 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 TTRP02766 147 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 IGFBP3P17936 291 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 ADRA2CP18825 462 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 CD33P20138 364 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 RFC3P40938 356 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 MMP15P51511 669 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 ART1P52961 327 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 CLDN18P56856 261 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 MRPS10P82664 201 aaKnown RBP9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 PHYHD1Q5SRE7 291 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 SERPINA12Q8IW75 414 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF283Q8N7M2 679 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 OR4M2Q8NGB6 313 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 NABP1Q96AH0 204 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 ORAI1Q96D31 301 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 LINC00470Q9BZP3 86 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 HDHD2Q9H0R4 259 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 CACNA1CQ13936 2221 aa9.32□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A087WV48 116 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 J3QW42 95 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 P2RY10O00398 339 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 SLC17A2O00624 439 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 RER1O15258 196 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 MRPL33O75394 65 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 GHRHP01286 108 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 CST2P09228 141 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ACSM4P0C7M7 580 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 CX3CR1P49238 355 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 TNFSF10P50591 281 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 PCBD1P61457 104 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 HIST1H3AP68431 136 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 SCRN3Q0VDG4 424 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ECH1Q13011 328 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ENDOGQ14249 297 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 RNPS1Q15287 305 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 TAB1Q15750 504 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 RAB11BQ15907 218 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 NRN1LQ496H8 165 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ELFN2Q5R3F8 820 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 HIST2H3PS2Q5TEC6 136 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 IGFL2Q6UWQ7 119 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 HIST2H3AQ71DI3 136 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ENKURQ8TC29 256 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 SPTSSAQ969W0 71 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 PPP1R14AQ96A00 147 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ABHD17AQ96GS6 310 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ZC3HAV1LQ96H79 300 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 THAP7Q9BT49 309 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 PRRG4Q9BZD6 226 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 SLC6A15Q9H2J7 730 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 LDAHQ9H6V9 325 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 EXO5Q9H790 373 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 PNRC2Q9NPJ4 139 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 SLC17A5Q9NRA2 495 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF275Q9NSD4 429 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 NOSIPQ9Y314 301 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 CENPXA8MT69 81 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF724A8MTY0 619 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 GSTZ1O43708 216 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 KRT33AO76009 404 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 FARS2O95363 451 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 HNRNPCP07910 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ERCC1P07992 297 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 CD37P11049 281 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 MNDAP41218 407 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 MAP2K3P46734 347 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms