RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 C1QTNF6Q9BXI9 259 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 HHATLQ9HCP6 504 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 RAB22AQ9UL26 194 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 LEFTY2O00292 366 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 EIF3GO75821 320 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMC6-207ENST00000448223 EIF4EP06730 217 aaKnown RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 CT45A8P0DMV1 189 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 CT45A9P0DMV2 189 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 PCMT1P22061 227 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 BLVRBP30043 206 aaPredicted RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 HTRA3P83110 453 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 CATR1Q13166 79 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 SKP2Q13309 424 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 CT45A2Q5DJT8 189 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 OR7E24Q6IFN5 339 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 DCXRQ7Z4W1 244 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 MBD3L1Q8WWY6 194 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 TBX15Q96SF7 602 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 DDA1Q9BW61 102 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 C1QTNF3Q9BXJ4 246 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 TMEM191AQ9H0A3 160 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 ZNF160Q9HCG1 818 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 ABI3Q9P2A4 366 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 CCL26Q9Y258 94 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 ZNF835Q9Y2P0 537 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 GPR55Q9Y2T6 319 aaPredicted RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 SCN4AP35499 1836 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 PAPPA2Q9BXP8 1791 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 TRAV27A0A087WT01 109 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 POU3F3P20264 500 aaPredicted RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 RAG2P55895 527 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 PRRT3Q5FWE3 981 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 C9orf62Q8N4C0 152 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 EIF4E3Q8N5X7 224 aaKnown RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 OR5AU1Q8NGC0 362 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 SPTSSAQ969W0 71 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 BMFQ96LC9 184 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 MED20Q9H944 212 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 CA12O43570 354 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 ADAMTS4O75173 837 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 CST4P01036 141 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 CRYABP02511 175 aaKnown RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 DBHP09172 617 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 HOXB1P14653 301 aaPredicted RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 OPRD1P41143 372 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 EIF4EBP2Q13542 120 aaPredicted RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 UBE2V2Q15819 145 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMC6-207ENST00000448223 B3GNTL1Q67FW5 361 aaPredicted RBP8.42□□□□□ -1.06
SMC6-207ENST00000448223 PRR22Q8IZ63 422 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 NUDT22Q9BRQ3 303 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 OR2D2Q9H210 308 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 DEC1Q9P2X7 70 aa8.42□□□□□ -1.06
SMC6-207ENST00000448223 MCRIP1C9JLW8 97 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 EPXP11678 715 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 ZNF30P17039 623 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 CNN3Q15417 329 aaKnown RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 PHLDA2Q53GA4 152 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 FA2HQ7L5A8 372 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 LYG2Q86SG7 212 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 DND1Q8IYX4 353 aaKnown RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 OR14C36Q8NHC7 312 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 TREM2Q9NZC2 230 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 PLSCR5A0PG75 271 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 FITM1A5D6W6 292 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 HMSDA8MTL9 139 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 FCN1O00602 326 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 RHBDL1O75783 438 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 SULT1A3P0DMM9 295 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 SULT1A4P0DMN0 295 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 SULT1A1P50225 295 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 GLYATL3Q5SZD4 288 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 LAIR1Q6GTX8 287 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 PSRC1Q6PGN9 363 aaPredicted RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 CSNK1A1LQ8N752 337 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 WFIKKN2Q8TEU8 576 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 ASB11Q8WXH4 323 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 WFIKKN1Q96NZ8 548 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 MARVELD1Q9BSK0 173 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 SOX7Q9BT81 388 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 CHRDL1Q9BU40 450 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 HDAC8Q9BY41 377 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 MSRAQ9UJ68 235 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 C5orf52A6NGY3 159 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 OR5K4A6NMS3 321 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 GEMIN2O14893 280 aaKnown RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 PRKRAO75569 313 aaKnown RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 NXPH3O95157 252 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 CRISP2P16562 243 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 PSMB5P28074 263 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 GCH1P30793 250 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 FHITP49789 147 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 HLA-DRB3P79483 266 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 NNATQ16517 81 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 TMEM241Q24JQ0 296 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 SYT9Q86SS6 491 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 OR10A7Q8NGE5 316 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 OR5M9Q8NGP3 310 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 APH1AQ96BI3 265 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms