RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 OR5H8P0DN80 308 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 BSGP35613 385 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 PPICP45877 212 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 ARL16Q0P5N6 197 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 SLC17A1Q14916 467 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 GPNMBQ14956 572 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 TIGITQ495A1 244 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 PYCR3Q53H96 274 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 CORO6Q6QEF8 472 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR1J1Q8NGS3 322 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR2G2Q8NGZ5 317 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR4F5Q8NH21 305 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 RPUSD4Q96CM3 377 aaKnown RBP7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR4F4Q96R69 305 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF251Q9BRH9 671 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 ACTR3CQ9C0K3 210 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OR51I2Q9H344 312 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 OPA3Q9H6K4 179 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 KLK11Q9UBX7 282 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 KCND3Q9UK17 655 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 SLC22A13Q9Y226 551 aa7.08□□□□□ -1.28
NEDD9-204ENST00000448183 B3GALNT1O75752 331 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 OPRM1P35372 400 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 RPS27P42677 84 aaKnown RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 EMP3P54852 163 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 LINC00303Q3SY05 128 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 THEM4Q5T1C6 240 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ASTLQ6HA08 431 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 OR10P1Q8NGE3 313 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 APH1AQ96BI3 265 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 TVP23CQ96ET8 276 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 DERL3Q96Q80 235 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 SPACA5Q96QH8 159 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 OR2A14Q96R47 310 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 SMIM7Q9BQ49 75 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ISG20L2Q9H9L3 353 aaKnown RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 MBNL1Q9NR56 388 aaKnown RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 TBC1D29Q9UFV1 150 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 R4GMQ9 66 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 A0A087WV62 115 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 TRBV5-4A0A0C4DH59 114 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 hCG_1809904A0A1W2PP81 198 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 A0A1W2PPE2 198 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 A0A1W2PR64 198 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 A0A1W2PRV1 198 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 RFPL4AA6NLU0 287 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 RFPL4AL1F8VTS6 287 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 M0R135 149 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF749O43361 778 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 WDR1O75083 606 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ETHE1O95571 254 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 GRPP07492 148 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 NTF3P20783 257 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 TBC1D28Q2M2D7 210 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 PRSS36Q5K4E3 855 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF787Q6DD87 383 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 RPS19BP1Q86WX3 136 aaKnown RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ZFP62Q8NB50 900 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF485Q8NCK3 441 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 OR13D1Q8NGV5 346 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 OR52N5Q8NH56 324 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 RXFP4Q8TDU9 374 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF799Q96GE5 643 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 RTL8AQ9BWD3 113 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 MTCH1Q9NZJ7 389 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 TMEFF2Q9UIK5 374 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF816-ZNF321PA0A0X1KG74 233 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 A0A1B0GTL3 188 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 PRSS37A4D1T9 235 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 UPK1AO00322 258 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 HS3ST1O14792 307 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 SSSCA1O60232 199 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 MBP02144 154 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 NME1P15531 152 aaKnown RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 FGF9P31371 208 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 SUB1P53999 127 aaKnown RBP eCLIP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 EXT1Q16394 746 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 RNF151Q2KHN1 245 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 SLC25A35Q3KQZ1 300 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 HSF5Q4G112 596 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 FAM27D1Q5T7N8 215 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF468Q5VIY5 522 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 CALHM3Q86XJ0 350 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 ZNF321PQ8N8H1 164 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 CORO2AQ92828 525 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 SLC35E1Q96K37 410 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 TXNIPQ9H3M7 391 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 RIMS4Q9H426 269 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 GAR1Q9NY12 217 aaKnown RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 POLDIP2Q9Y2S7 368 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 NUMBLQ9Y6R0 609 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 N4BP2Q86UW6 1770 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-204ENST00000448183 UBR2Q8IWV8 1755 aa7.07□□□□□ -1.28
NEDD9-204ENST00000448183 NKX6-3A6NJ46 265 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 G3V3Q6 166 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 HRO43593 1189 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 FABP1P07148 127 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 UQCC3Q6UW78 93 aa7.06□□□□□ -1.28
NEDD9-204ENST00000448183 FAM185AQ8N0U4 392 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms