RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 OR9Q1Q8NGQ5 310 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 CXorf56Q9H5V9 222 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 MARCH7Q9H992 704 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 ASH2LQ9UBL3 628 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 ATPIF1Q9UII2 106 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 SPEF1Q9Y4P9 236 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 FAM183AA6NL82 134 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 TRIM64CA6NLI5 447 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 RER1O15258 196 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 SGCEO43556 437 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 PRKYO43930 277 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 SMPD2O60906 423 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 NOL3O60936 208 aaKnown RBP12.16□□□□□ -0.46
SREBF1-207ENST00000447641 WBP4O75554 376 aaKnown RBP12.16□□□□□ -0.46
SREBF1-207ENST00000447641 GYPBP06028 91 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 OR4A8P0C604 315 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 HTR1FP30939 366 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 APLNRP35414 380 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 UCP2P55851 309 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 SLC35A2P78381 396 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 SNTB2Q13425 540 aaKnown RBP12.16□□□□□ -0.46
SREBF1-207ENST00000447641 RSPO1Q2MKA7 263 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-207ENST00000447641 KRTAP27-1Q3LI81 207 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 SLC35D3Q5M8T2 416 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 SLC18B1Q6NT16 456 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 CLEC9AQ6UXN8 241 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 CXXC5Q7LFL8 322 aaKnown RBP12.16□□□□□ -0.46
SREBF1-207ENST00000447641 GJC3Q8NFK1 279 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 OR51L1Q8NGJ5 315 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 PLK3Q9H4B4 646 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 MED20Q9H944 212 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 CDH20Q9HBT6 801 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 HINT3Q9NQE9 182 aaKnown RBP12.16□□□□□ -0.46
SREBF1-207ENST00000447641 PCDHGB5Q9Y5G0 923 aa12.16□□□□□ -0.46
SREBF1-207ENST00000447641 C5orf49A4QMS7 147 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 GPRIN2O60269 458 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 ENTPD6O75354 484 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 CDK1P06493 297 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 PSKH1P11801 424 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 SLC2A5P22732 501 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 DCKP27707 260 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 WNT5AP41221 380 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 MTNR1AP48039 350 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 PTH2RP49190 550 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 EVX1P49640 407 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 GDI2P50395 445 aaKnown RBP12.15□□□□□ -0.46
SREBF1-207ENST00000447641 GALK2Q01415 458 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 RAB35Q15286 201 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 RNLSQ5VYX0 342 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 CORO6Q6QEF8 472 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 LYPD4Q6UWN0 246 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 AHSA2Q719I0 299 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 GPR141Q7Z602 305 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 CPOQ8IVL8 374 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 CIARTQ8N365 385 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-207ENST00000447641 ZNF511Q8NB15 262 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 OR1F12Q8NHA8 337 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 APH1BQ8WW43 257 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 OTULINQ96BN8 352 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 TMEM80Q96HE8 168 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 ZNF582Q96NG8 517 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-207ENST00000447641 DOK1Q99704 481 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 WDR76Q9H967 626 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 PNRC2Q9NPJ4 139 aaKnown RBP12.15□□□□□ -0.46
SREBF1-207ENST00000447641 INPP5EQ9NRR6 644 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 MRPS18AQ9NVS2 196 aaKnown RBP12.15□□□□□ -0.46
SREBF1-207ENST00000447641 ERGIC3Q9Y282 383 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 EXOSC1Q9Y3B2 195 aaKnown RBP12.15□□□□□ -0.46
SREBF1-207ENST00000447641 COMMD3-BMI1R4GMX3 469 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 MXRA5Q9NR99 2828 aa12.15□□□□□ -0.46
SREBF1-207ENST00000447641 TVP23AA6NH52 213 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 VSTM5A8MXK1 200 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 B9A039 149 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 H7C417 338 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 XPNPEP2O43895 674 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 DOK2O60496 412 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 GLCEO94923 617 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 LY6G6DO95868 133 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 HLA-DQA2P01906 255 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 SMIM18P0DKX4 95 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 DBTP11182 482 aaKnown RBP12.14□□□□□ -0.47
SREBF1-207ENST00000447641 ZNF250P15622 560 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 RAD52P43351 418 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 ACTC1P68032 377 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 ACTA1P68133 377 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 ST3GAL4Q11206 333 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 PLBD1Q6P4A8 553 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 VHLLQ6RSH7 139 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 PRSS57Q6UWY2 283 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 CFAP77Q6ZQR2 320 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 KCTD8Q6ZWB6 473 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 C1orf174Q8IYL3 243 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 ZNF101Q8IZC7 436 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 OR10H5Q8NGA6 315 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 OR10S1Q8NGN2 331 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 RORBQ92753 470 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 MRPL24Q96A35 216 aaKnown RBP12.14□□□□□ -0.47
SREBF1-207ENST00000447641 COX4I2Q96KJ9 171 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 C4orf45Q96LM5 186 aa12.14□□□□□ -0.47
SREBF1-207ENST00000447641 HDHD2Q9H0R4 259 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms