RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 DHRS13Q6UX07 377 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 GALMQ96C23 342 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 RASD2Q96D21 266 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TEAD3Q99594 435 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 ASH2LQ9UBL3 628 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 SNAPINO95295 136 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 HOXB5P09067 269 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 GCAP28676 217 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 NKX6-1P78426 367 aaPredicted RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 LTC4SQ16873 150 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 C9orf152Q5JTZ5 239 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PLPP5Q8NEB5 264 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 FAM71CQ8NEG0 241 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 SSX3Q99909 188 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 SLC38A1Q9H2H9 487 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 ACKR4Q9NPB9 350 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 SMCO4Q9NRQ5 59 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 CEPT1Q9Y6K0 416 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 MASP2O00187 686 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TOXO94900 526 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 FBP1P09467 338 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PSMB3P49720 205 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF750Q32MQ0 723 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TCTN3Q6NUS6 607 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 GALNT16Q8N428 558 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 RHOXF1Q8NHV9 184 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PELI1Q96FA3 418 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 GAL3ST2Q9H3Q3 398 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 SLAMF8Q9P0V8 285 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 CD3EP07766 207 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PPP3CBP16298 524 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 RAB4AP20338 218 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 MMP11P24347 488 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 RPL11P62913 178 aaKnown RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 HEPHL1Q6MZM0 1159 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 OR2Y1Q8NGV0 311 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 OR52N5Q8NH56 324 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 IGHV3-20A0A0C4DH32 117 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PRICKLE3O43900 615 aaPredicted RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TMIGD3P0DMS9 266 aaPredicted RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 APEHP13798 732 aaKnown RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 SLC25A1P53007 311 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 OR10A3P58181 314 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 RPL18Q07020 188 aaKnown RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 RAB35Q15286 201 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TMPRSS7Q7RTY8 843 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PKMYT1Q99640 499 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TCEAL7Q9BRU2 100 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 CA10Q9NS85 328 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TMEM30CPA0ZSE6 113 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PPP6CO00743 305 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 GIFP27352 417 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 CCSMST1Q4G0I0 132 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 CST9LP1Q5W188 147 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 LCN10Q6JVE6 187 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 PAQR6Q6TCH4 344 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 FAM58AQ8N1B3 248 aa7.75□□□□□ -1.17
PTPN3-204ENST00000446349 TXNL4BQ9NX01 149 aaKnown RBP7.75□□□□□ -1.17
PTPN3-204ENST00000446349 CDK2AP1O14519 115 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 PMPCAQ10713 525 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 TIGITQ495A1 244 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 FBXW5Q969U6 566 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 ARPC5LQ9BPX5 153 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 SERPINE3A8MV23 424 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 EDIL3O43854 480 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 ARNTP27540 789 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 MICBQ29980 383 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 ADPRMQ3LIE5 342 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 VMA21Q3ZAQ7 101 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 SOWAHCQ53LP3 525 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-204ENST00000446349 KRTCAP3Q53RY4 240 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 NHSL2Q5HYW2 709 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 SHEQ5VZ18 495 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 LGALS14Q8TCE9 139 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 TSLPQ969D9 159 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 GNPNAT1Q96EK6 184 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-204ENST00000446349 WDR34Q96EX3 536 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPN3-204ENST00000446349 FOXJ3Q9UPW0 622 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 IFNL4K9M1U5 179 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 NKX2-2O95096 273 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 F10P00742 488 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 CAPNS1P04632 268 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 PCK2Q16822 640 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 RETREG3Q86VR2 466 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 NEIL1Q96FI4 390 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-204ENST00000446349 DPCDQ9BVM2 203 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-204ENST00000446349 SF3B5Q9BWJ5 86 aaKnown RBP7.74□□□□□ -1.17
PTPN3-204ENST00000446349 GABARAPL3Q9BY60 117 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 LHX9Q9NQ69 397 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 MTCH2Q9Y6C9 303 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 SLC2A1P11166 492 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 SPI1P17947 270 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 BRS3P32247 399 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 FXNQ16595 210 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 LIMS2Q7Z4I7 341 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 ANKRD37Q7Z713 158 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 ASF1BQ9NVP2 202 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 SLC23A1Q9UHI7 598 aa7.74□□□□□ -1.17
PTPN3-204ENST00000446349 CABIN1Q9Y6J0 2220 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms