RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 FAM71F1Q96KD3 344 aaPredicted RBP6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF75AQ96N20 296 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 NKX3-1Q99801 234 aaPredicted RBP6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF649Q9BS31 505 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 HDHD5Q9BXW7 423 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 PPP1R3EQ9H7J1 279 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 PLCXD1Q9NUJ7 323 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF319Q9P2F9 582 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 NDRG3Q9UGV2 375 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 DIMT1Q9UNQ2 313 aaKnown RBP6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 EXOSC1Q9Y3B2 195 aaKnown RBP6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 ALPK2Q86TB3 2170 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 NBASA2RRP1 2371 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 ADGRG4Q8IZF6 3080 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 RP1L1Q8IWN7 2480 aaPredicted RBP6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 FLNCQ14315 2725 aa6.54□□□□□ -1.36
SF3A3P1-201ENST00000446317 ARPC4-TTLL3A0A0A6YYG9 625 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 IGHV2OR16-5A0A0B4J2B6 119 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 A0A1W2PPK0 400 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR6C6A6NF89 314 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ANKRD61A6NGH8 418 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 M0R135 149 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 CASKO14936 926 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ATP6V1G1O75348 118 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TNFAIP8O95379 198 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 CNOT4O95628 575 aaKnown RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ABHD16AO95870 558 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 HRGP04196 525 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 SERPINA5P05154 406 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ACSM4P0C7M7 580 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 CD40P25942 277 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 KIR3DL2P43630 455 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 RIDAP52758 137 aaKnown RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 BLVRAP53004 296 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ACTC1P68032 377 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ACTA1P68133 377 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 HIST1H3AP68431 136 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 NAAAQ02083 359 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 EMX1Q04741 257 aaPredicted RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 GALEQ14376 348 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TSTQ16762 297 aaKnown RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 MSMPQ1L6U9 139 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TBC1D28Q2M2D7 210 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TEX30Q5JUR7 227 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 GLYATL3Q5SZD4 288 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 HIST2H3PS2Q5TEC6 136 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 SP5Q6BEB4 398 aaPredicted RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF787Q6DD87 383 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF773Q6PK81 442 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 HIST2H3AQ71DI3 136 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF627Q7L945 461 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 LRP11Q86VZ4 500 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 BHLHE23Q8NDY6 225 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR10AC1Q8NH08 325 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 RNF133Q8WVZ7 376 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 NRGNQ92686 78 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 RORBQ92753 470 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TMEM203Q969S6 136 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TMIGD2Q96BF3 282 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 PELI1Q96FA3 418 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 LRRC46Q96FV0 321 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF799Q96GE5 643 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 POM121L2Q96KW2 1035 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TSC22D3Q99576 134 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 KCNS3Q9BQ31 491 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 SYT3Q9BQG1 590 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TMED9Q9BVK6 235 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 DUSP21Q9H596 190 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 HAO2Q9NYQ3 351 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 CNOT2Q9NZN8 540 aaKnown RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 POU2F3Q9UKI9 436 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 STARD10Q9Y365 291 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ESPL1Q14674 2120 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TMEM269A0A1B0GVZ9 245 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 LOC110117498-PIK3R3F6TDL0 507 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 CLPTM1O96005 669 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 PIPP12273 146 aaPredicted RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 CRYGSP22914 178 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 DCKP27707 260 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 MPV17P39210 176 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 SOX2P48431 317 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 FABP6P51161 128 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 SNTB2Q13425 540 aaKnown RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 PCK2Q16822 640 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 FBXL19-AS1Q494R0 122 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 CDONQ4KMG0 1287 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 TMEM255AQ5JRV8 349 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 WDR38Q5JTN6 314 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 BCL2L15Q5TBC7 163 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 LIPKQ5VXJ0 399 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 KCTD18Q6PI47 426 aaPredicted RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ZNF679Q8IYX0 411 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 ALDH16A1Q8IZ83 802 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 C17orf78Q8N4C9 275 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 NANOGP1Q8N7R0 232 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR8B12Q8NGG6 310 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR1J1Q8NGS3 322 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 OR51E1Q8TCB6 317 aa6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 IPCEF1Q8WWN9 437 aaPredicted RBP6.53□□□□□ -1.36
SF3A3P1-201ENST00000446317 SPTSSAQ969W0 71 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms