RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 LAMA4Q16363 1823 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 OR10J4P0C629 311 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 MPGP29372 298 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 TIGITQ495A1 244 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 MOB1BQ7L9L4 216 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 OR5B3Q8NH48 314 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 OBP2BQ9NPH6 170 aa16.97■□□□□ 0.31
SHANK3-203ENST00000445220 COA3Q9Y2R0 106 aaPredicted RBP16.97■□□□□ 0.31
SHANK3-203ENST00000445220 CSNK1G2P78368 415 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 NKG7Q16617 165 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 TOMM20LQ6UXN7 152 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF429Q86V71 674 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 CMBLQ96DG6 245 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 CCNL2Q96S94 520 aaPredicted RBP16.96■□□□□ 0.31
SHANK3-203ENST00000445220 PLA2G12AQ9BZM1 189 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 CCL26Q9Y258 94 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 AP4M1O00189 453 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 HMGA1P17096 107 aaKnown RBP16.96■□□□□ 0.31
SHANK3-203ENST00000445220 POU3F2P20265 443 aaPredicted RBP16.96■□□□□ 0.31
SHANK3-203ENST00000445220 ACOT6Q3I5F7 207 aaPredicted RBP16.96■□□□□ 0.31
SHANK3-203ENST00000445220 TMEM201Q5SNT2 666 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 AGBL4Q5VU57 503 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 SLC38A6Q8IZM9 456 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 DERL3Q96Q80 235 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 UCK1Q9HA47 277 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 BCL2L10Q9HD36 194 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 TMEM184BQ9Y519 407 aaPredicted RBP16.96■□□□□ 0.31
SHANK3-203ENST00000445220 PTBP3O95758 552 aaKnown RBP16.96■□□□□ 0.31
SHANK3-203ENST00000445220 QDPRP09417 244 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 PI3P19957 117 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF92Q03936 586 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 ZNF385BQ569K4 471 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 EMC4Q5J8M3 183 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 ELFN2Q5R3F8 820 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 THNSL2Q86YJ6 484 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 TMEFF1Q8IYR6 380 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 DUSP18Q8NEJ0 188 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 CTDSP1Q9GZU7 261 aa16.96■□□□□ 0.31
SHANK3-203ENST00000445220 SDCBPO00560 298 aaPredicted RBP16.96■□□□□ 0.3
SHANK3-203ENST00000445220 SSSCA1O60232 199 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 ZFAND5O76080 213 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 RPA2P15927 270 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 CRYBB2P43320 205 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 SLC35A1P78382 337 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 EGR3Q06889 387 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 CCSMST1Q4G0I0 132 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 ADIPOR2Q86V24 386 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 OR51H1Q8NH63 302 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 GPX8Q8TED1 209 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 PIGLQ9Y2B2 252 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 ASB1Q9Y576 335 aa16.96■□□□□ 0.3
SHANK3-203ENST00000445220 KCNJ3P48549 501 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 DUSP5Q16690 384 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 GSG1Q2KHT4 349 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 LCORQ96JN0 433 aaPredicted RBP16.95■□□□□ 0.3
SHANK3-203ENST00000445220 ARHGDIGQ99819 225 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 LRIT1Q9P2V4 623 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 MMP24Q9Y5R2 645 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 CST4P01036 141 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 SLC6A12P48065 614 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 CLEC12BQ2HXU8 276 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 Q3ZCU0 254 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 ZNF66Q6ZN08 573 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 CXorf58Q96LI9 332 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 TPPP3Q9BW30 176 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 GLI4P10075 376 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 GALP22466 123 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 MPPED2Q15777 294 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 FAM24BQ8N5W8 94 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 CMTM2Q8TAZ6 248 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 SPPL3Q8TCT6 385 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 FAM122AQ96E09 287 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 CTRB1P17538 263 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 NOVA1P51513 510 aaKnown RBP16.95■□□□□ 0.3
SHANK3-203ENST00000445220 MLF1P58340 268 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 UBE2G2P60604 165 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 MIDNQ504T8 468 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 FAM27D1Q5T7N8 215 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 C12orf73Q69YU5 71 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 CTRB2Q6GPI1 263 aa16.95■□□□□ 0.3
SHANK3-203ENST00000445220 RTN4RL1Q86UN2 441 aaPredicted RBP16.95■□□□□ 0.3
SHANK3-203ENST00000445220 C19orf47Q8N9M1 422 aaKnown RBP16.95■□□□□ 0.3
SHANK3-203ENST00000445220 COL22A1Q8NFW1 1626 aaPredicted RBP16.95■□□□□ 0.3
SHANK3-203ENST00000445220 TRBV11-1A0A0K0K1C0 115 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 LINC00862A6NCI5 91 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 HMSDA8MTL9 139 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 CASP6P55212 293 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 TMEM128Q5BJH2 165 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 TMEM268Q5VZI3 342 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 CALHM3Q86XJ0 350 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 IGLV3-25P01717 112 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 PCMT1P22061 227 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 STPG2Q8N412 459 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 GJC3Q8NFK1 279 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 NXPE3Q969Y0 559 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 SDF2Q99470 211 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
SHANK3-203ENST00000445220 WNT1P04628 370 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 ZNF250P15622 560 aa16.94■□□□□ 0.3
SHANK3-203ENST00000445220 TFAP2EQ6VUC0 442 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms