RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 SLC25A19Q9HC21 320 aa11.51□□□□□ -0.57
GARNL3-208ENST00000444677 PAPOLBQ9NRJ5 636 aaKnown RBP11.51□□□□□ -0.57
GARNL3-208ENST00000444677 CENPMQ9NSP4 180 aa11.51□□□□□ -0.57
GARNL3-208ENST00000444677 TVP23BQ9NYZ1 205 aa11.51□□□□□ -0.57
GARNL3-208ENST00000444677 KIF17Q9P2E2 1029 aa11.51□□□□□ -0.57
GARNL3-208ENST00000444677 GPR160Q9UJ42 338 aa11.51□□□□□ -0.57
GARNL3-208ENST00000444677 KCNG2Q9UJ96 466 aa11.51□□□□□ -0.57
GARNL3-208ENST00000444677 ARFGEF3Q5TH69 2177 aa11.51□□□□□ -0.57
GARNL3-208ENST00000444677 RTTNQ86VV8 2226 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 SAC3D1A6NKF1 404 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 PRR23D1E9PI22 279 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 M0R129 80 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 TPD52L2O43399 206 aaKnown RBP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 GLCEO94923 617 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 HMGN1P05114 100 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 PRR23D2P0DMB1 279 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 ZNF16P17020 682 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 ZNF23P17027 643 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 KITLGP21583 273 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 GSTT1P30711 240 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 RGS6P49758 472 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 PRKXP51817 358 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 PCK2Q16822 640 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 USP51Q70EK9 711 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 DPY19L4Q7Z388 723 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 BCDIN3DQ7Z5W3 292 aaKnown RBP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 HIPK1Q86Z02 1210 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 ERI1Q8IV48 349 aaKnown RBP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 C1orf174Q8IYL3 243 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 APOBEC3DQ96AK3 386 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 SLAMF6Q96DU3 332 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 PKP2Q99959 881 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 NARFLQ9H6Q4 476 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 NKIRAS2Q9NYR9 191 aa11.5□□□□□ -0.57
GARNL3-208ENST00000444677 FN1P02751 2386 aaKnown RBP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
GARNL3-208ENST00000444677 CHD3Q12873 2000 aaKnown RBP11.49□□□□□ -0.57
GARNL3-208ENST00000444677 G3V2T6 193 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 H3BNX3 289 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 H3BSA7 217 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 EBAG9O00559 213 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 SELENOFO60613 162 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 LCATP04180 440 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 TACSTD2P09758 323 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 ACHEP22303 614 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 POLR2IP36954 125 aaKnown RBP11.49□□□□□ -0.57
GARNL3-208ENST00000444677 GPR6P46095 362 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-208ENST00000444677 ACTR3P61158 418 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 ECH1Q13011 328 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 CDK5R2Q13319 367 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
GARNL3-208ENST00000444677 PTGES3Q15185 160 aaKnown RBP11.49□□□□□ -0.57
GARNL3-208ENST00000444677 SNAPC1Q16533 368 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 PCGF3Q3KNV8 242 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 KLHL12Q53G59 568 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 TEX30Q5JUR7 227 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 AVPI1Q5T686 147 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 KDM4DQ6B0I6 523 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 FBXW12Q6X9E4 464 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 TIGD4Q8IY51 512 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 OR6N2Q8NGY6 317 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 ST7LQ8TDW4 575 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 MSI2Q96DH6 328 aaKnown RBP11.49□□□□□ -0.57
GARNL3-208ENST00000444677 INTS14Q96SY0 518 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 MARCH7Q9H992 704 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 KRT84Q9NSB2 600 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 DECR2Q9NUI1 292 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 DCAF16Q9NXF7 216 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 TMEFF2Q9UIK5 374 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-208ENST00000444677 N6AMT1Q9Y5N5 214 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 NAV3Q8IVL0 2385 aa11.49□□□□□ -0.57
GARNL3-208ENST00000444677 IGHV1-69-2A0A0G2JMI3 117 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 PLSCR5A0PG75 271 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 H0YL77 283 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 M0R135 149 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 PPIHO43447 177 aaKnown RBP11.48□□□□□ -0.57
GARNL3-208ENST00000444677 PRKYO43930 277 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 MT-ND5P03915 603 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 SLC2A1P11166 492 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 RAC2P15153 192 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 TUBG1P23258 451 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 CRYBB2P43320 205 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 HCCSP53701 268 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 TPTEP56180 551 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 PPP2R2BQ00005 443 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 MVKQ03426 396 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 SNAI3Q3KNW1 292 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 C6orf52Q5T4I8 152 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 CYB5R2Q6BCY4 276 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 CXXC5Q7LFL8 322 aaKnown RBP11.48□□□□□ -0.57
GARNL3-208ENST00000444677 ZDHHC13Q8IUH4 622 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 PARP8Q8N3A8 854 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 ZNF799Q96GE5 643 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 COPS4Q9BT78 406 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 ABHD6Q9BV23 337 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 GABARAPL1Q9H0R8 117 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 SAP30LQ9HAJ7 183 aa11.48□□□□□ -0.57
GARNL3-208ENST00000444677 TUBG2Q9NRH3 451 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms