RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SRD5A1P18405 259 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 POU1F1P28069 291 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 ECH1Q13011 328 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 HNRNPA0Q13151 305 aaKnown RBP17.87■□□□□ 0.45
CDKN3-204ENST00000442975 SPRNQ5BIV9 151 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 OR2T2Q6IF00 324 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 ZNRF4Q8WWF5 429 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 RBM4Q9BWF3 364 aaKnown RBP17.87■□□□□ 0.45
CDKN3-204ENST00000442975 YY1AP1Q9H869 796 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 WIPI2Q9Y4P8 454 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 COMMD3-BMI1R4GMX3 469 aa17.87■□□□□ 0.45
CDKN3-204ENST00000442975 ARRDC5A6NEK1 342 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 B4DSR2 109 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 FAM157AC9JC47 383 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 FKBP6O75344 327 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 CD55P08174 381 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 ACSM4P0C7M7 580 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 CLUP10909 449 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 RAC2P15153 192 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 HOXB6P17509 224 aaKnown RBP17.86■□□□□ 0.45
CDKN3-204ENST00000442975 SPI1P17947 270 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 CBX1P83916 185 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 ZNF362Q5T0B9 420 aaPredicted RBP17.86■□□□□ 0.45
CDKN3-204ENST00000442975 Q6ZR03 302 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 TMEM179BQ7Z7N9 219 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 GLCCI1Q86VQ1 547 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 BHLHE23Q8NDY6 225 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 RAB1CQ92928 201 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 PTP4A1Q93096 173 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 HAVCR1Q96D42 359 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 MAP6Q96JE9 813 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 DDOQ99489 341 aa17.86■□□□□ 0.45
CDKN3-204ENST00000442975 PNRC2Q9NPJ4 139 aaKnown RBP17.86■□□□□ 0.45
CDKN3-204ENST00000442975 CHD3Q12873 2000 aaKnown RBP17.86■□□□□ 0.45
CDKN3-204ENST00000442975 ATRQ13535 2644 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 LCATP04180 440 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 PSKH1P11801 424 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 FMO3P31513 532 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 SLC6A9P48067 706 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 SLC25A1P53007 311 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 PRSS12P56730 875 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 CDK5R2Q13319 367 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 CD300LDQ6UXZ3 194 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 FBXW12Q6X9E4 464 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 HS3ST5Q8IZT8 346 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 ATG16L2Q8NAA4 619 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 ZNF511Q8NB15 262 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 OR10AD1Q8NGE0 317 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 SPTSSAQ969W0 71 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 C1orf159Q96HA4 380 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 GAL3ST1Q99999 423 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 COPS4Q9BT78 406 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 ZNF665Q9H7R5 613 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 ZNF556Q9HAH1 456 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 CMC2Q9NRP2 79 aa17.85■□□□□ 0.45
CDKN3-204ENST00000442975 FAM183AA6NL82 134 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 M0R135 149 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 MSMBP08118 114 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 ENTPD1P49961 510 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 TPTEP56180 551 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 SLC3A1Q07837 685 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 KRTAP27-1Q3LI81 207 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 DCXRQ7Z4W1 244 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 OR51F2Q8NH61 342 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 RAB39BQ96DA2 213 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 ZNF799Q96GE5 643 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 ZNF582Q96NG8 517 aaPredicted RBP17.84■□□□□ 0.45
CDKN3-204ENST00000442975 HCAR1Q9BXC0 346 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 CADM1Q9BY67 442 aaKnown RBP17.84■□□□□ 0.45
CDKN3-204ENST00000442975 MED20Q9H944 212 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 DCAF16Q9NXF7 216 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 CUBNO60494 3623 aa17.84■□□□□ 0.45
CDKN3-204ENST00000442975 TCRBV3S1A0A5B6 114 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 GRK5P34947 590 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 SRP14P37108 136 aaKnown RBP17.83■□□□□ 0.44
CDKN3-204ENST00000442975 DVL1P1P54792 670 aaPredicted RBP17.83■□□□□ 0.44
CDKN3-204ENST00000442975 LMO4P61968 165 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 BNIP1Q12981 228 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 MALLQ13021 153 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 RSPO1Q2MKA7 263 aaPredicted RBP17.83■□□□□ 0.44
CDKN3-204ENST00000442975 SPATC1Q76KD6 591 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 PEG10Q86TG7 708 aaKnown RBP17.83■□□□□ 0.44
CDKN3-204ENST00000442975 OR10S1Q8NGN2 331 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 ITLN1Q8WWA0 313 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 OR2V2Q96R30 315 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 MDFIQ99750 246 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 C1QTNF5Q9BXJ0 243 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 NMNAT2Q9BZQ4 307 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 HIF1ANQ9NWT6 349 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 UBAP1Q9NZ09 502 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 KIF17Q9P2E2 1029 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 DNAJB9Q9UBS3 223 aa17.83■□□□□ 0.44
CDKN3-204ENST00000442975 TMEFF2Q9UIK5 374 aaPredicted RBP17.83■□□□□ 0.44
CDKN3-204ENST00000442975 SURF4O15260 269 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 GSC2O15499 205 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 TNFRSF1AP19438 455 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 PCMT1P22061 227 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 RBMXP38159 391 aaKnown RBP17.82■□□□□ 0.44
CDKN3-204ENST00000442975 TAF13Q15543 124 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 SLC27A4Q6P1M0 643 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms