RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 C8orf82Q6P1X6 216 aaPredicted RBP6.57□□□□□ -1.36
CD44-211ENST00000442151 TBPL2Q6SJ96 375 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 C16orf89Q6UX73 402 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 FBXW12Q6X9E4 464 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 RFPL4BQ6ZWI9 263 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 FAM122BQ7Z309 247 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 CELF2-AS1Q8N7Q2 184 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 SPERTQ8NA61 448 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 OR52L1Q8NGH7 329 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 SLC7A13Q8TCU3 470 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 SPTSSAQ969W0 71 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 NSMCE2Q96MF7 247 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 ERMAPQ96PL5 475 aaPredicted RBP6.57□□□□□ -1.36
CD44-211ENST00000442151 ELAC2Q9BQ52 826 aaKnown RBP6.57□□□□□ -1.36
CD44-211ENST00000442151 TMPRSS13Q9BYE2 586 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 MSL2Q9HCI7 577 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 EMC7Q9NPA0 242 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 NDUFAF4Q9P032 175 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 ASH2LQ9UBL3 628 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 EGFL7Q9UHF1 273 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 NUP50Q9UKX7 468 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 ANK3Q12955 4377 aaKnown RBP6.57□□□□□ -1.36
CD44-211ENST00000442151 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.57□□□□□ -1.36
CD44-211ENST00000442151 SOCS2O14508 198 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 WNT9BO14905 357 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 NDUFA2O43678 99 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 IGHV2-70P01814 119 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 HLA-DQA2P01906 255 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 APOC1P02654 83 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 SF3A3Q12874 501 aaKnown RBP eCLIP6.57□□□□□ -1.36
CD44-211ENST00000442151 MESTQ5EB52 335 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 CD276Q5ZPR3 534 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 CGB2Q6NT52 195 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 C1orf94Q6P1W5 598 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 LSRQ86X29 649 aaPredicted RBP6.57□□□□□ -1.36
CD44-211ENST00000442151 KLBQ86Z14 1044 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 PLPP7Q8NBV4 271 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 SPRYD4Q8WW59 207 aaPredicted RBP6.57□□□□□ -1.36
CD44-211ENST00000442151 DHRS1Q96LJ7 313 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 PITX2Q99697 317 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 IFT27Q9BW83 186 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 NUAK2Q9H093 628 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 SYT4Q9H2B2 425 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 OPA3Q9H6K4 179 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 SRA1Q9HD15 236 aaKnown RBP6.57□□□□□ -1.36
CD44-211ENST00000442151 B9D1Q9UPM9 204 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 BAIAP2Q9UQB8 552 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 ADAM18Q9Y3Q7 739 aa6.57□□□□□ -1.36
CD44-211ENST00000442151 LOC105371242A0A075B767 164 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 A8MXK9 166 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 TMEM178BH3BS89 294 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 CDC42EP2O14613 210 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 OR10H3O60404 316 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 DCTN3O75935 186 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 VENTXO95231 258 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 FABP3P05413 133 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 LIPFP07098 398 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 H2AFB1P0C5Y9 115 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 H2AFB2P0C5Z0 115 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 HSD17B1P14061 328 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 CTLA4P16410 223 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 HOXB6P17509 224 aaKnown RBP6.56□□□□□ -1.36
CD44-211ENST00000442151 FPR3P25089 353 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 SLC6A9P48067 706 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 NPY4RP50391 375 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 GNB2P62879 340 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 LCN2P80188 198 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 SPIBQ01892 262 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 COX10Q12887 443 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 ZNF154Q13106 437 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 GK3PQ14409 553 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 C11orf91Q3C1V1 193 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 CCDC92Q53HC0 331 aaPredicted RBP6.56□□□□□ -1.36
CD44-211ENST00000442151 LEG1Q6P5S2 330 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 PGAM4Q8N0Y7 254 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 ARHGAP24Q8N264 748 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.56□□□□□ -1.36
CD44-211ENST00000442151 SEMA6DQ8NFY4 1073 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 OR8B3Q8NGG8 313 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 OR2T4Q8NH00 348 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 ITLN1Q8WWA0 313 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 NEIL1Q96FI4 390 aaPredicted RBP6.56□□□□□ -1.36
CD44-211ENST00000442151 OR2V2Q96R30 315 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 OR8B2Q96RD0 313 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 MS4A7Q9GZW8 240 aaPredicted RBP6.56□□□□□ -1.36
CD44-211ENST00000442151 MUC13Q9H3R2 512 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 PTTG3PQ9NZH4 202 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 INSIG2Q9Y5U4 225 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 SNX13Q9Y5W8 968 aa6.56□□□□□ -1.36
CD44-211ENST00000442151 IQCF6A8MYZ5 107 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 H7C1C5 153 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 IFNGP01579 166 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 LCATP04180 440 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 NCK1P16333 377 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 ZNF12P17014 697 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 CFPP27918 469 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 GRK5P34947 590 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 DDOSTP39656 456 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 LCN6P62502 163 aa6.55□□□□□ -1.36
CD44-211ENST00000442151 HIST1H3AP68431 136 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms