RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 C9orf170A2RU37 121 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 FAM172BPA6NC97 362 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 PMS2P5A8MQ11 134 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 G3V3Y1 287 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 CLDN34H7C241 214 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 K7EN84 100 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 MSH4O15457 936 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 TAPBPO15533 448 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 FADS1O60427 444 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 SLC19A2O60779 497 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 P04436 131 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 IFNW1P05000 195 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 CDK1P06493 297 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 WNT2P09544 360 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 PATE4P0C8F1 98 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 OCM2P0CE71 109 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 BCKDHAP12694 445 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 COX4I1P13073 169 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 IFI30P13284 250 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 CD1CP29017 333 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 RPL35P42766 123 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 MAP2K4P45985 399 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 SRP9P49458 86 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 THBS3P49746 956 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 IFITM2Q01629 132 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 SRSF6Q13247 344 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 SKP2Q13309 424 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 ASAH1Q13510 395 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 UPP1Q16831 310 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 SLC25A52Q3SY17 297 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF585BQ52M93 769 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 AKIRIN2Q53H80 203 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 SPIN3Q5JUX0 258 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 TIMM23BQ5SRD1 257 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 C1orf220Q5T0J3 134 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 IDNKQ5T6J7 187 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 ADAM5Q6NVV9 412 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 FRRS1Q6ZNA5 592 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 Q6ZSR3 168 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 CARM1Q86X55 608 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 HSD17B11Q8NBQ5 300 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR8J3Q8NGG0 315 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR1B1Q8NGR6 318 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR10K1Q8NGX5 313 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 STOML3Q8TAV4 291 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 NABP1Q96AH0 204 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZFP3Q96NJ6 502 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 ATF6BQ99941 703 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 KIR3DX1Q9H7L2 352 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 RGS18Q9NS28 235 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 DEPPQ9NTK1 212 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 C1orf109Q9NX04 203 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 TREM2Q9NZC2 230 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 DKKL1Q9UK85 242 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 COPS3Q9UNS2 423 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 PNPLA6Q8IY17 1366 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 EEA1Q15075 1411 aa3.37□□□□□ -1.87
CDC42BPA-207ENST00000441725 KBTBD11-OT1A0A1B0GTJ5 212 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 RNF212BA8MTL3 300 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 BLOC1S5-TXNDC5H3BN57 136 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 DFFAO00273 331 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 DLEU1O43261 78 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CHST1O43916 411 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CNIH1O95406 144 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 H2BFMP0C1H6 154 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 T-ENOLP0DO92 83 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 NQO1P15559 274 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 GNB3P16520 340 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 NELFEP18615 380 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CEACAM6P40199 344 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 RPL5P46777 297 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 VSX2P58304 361 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ERVK-16P61578 105 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 SF3A2Q15428 464 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 GRK1Q15835 563 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ACSM3Q53FZ2 586 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 TNFAIP8L3Q5GJ75 292 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 OTUD3Q5T2D3 398 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 PWWP2BQ6NUJ5 590 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 DNM1P34Q6PK57 102 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 APOOLQ6UXV4 268 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 STAC2Q6ZMT1 411 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ACOT7LQ6ZUV0 252 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 TRAPPC5Q8IUR0 188 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ERI1Q8IV48 349 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM251Q8N6I4 163 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CLDN22Q8N7P3 220 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 SAMD12Q8N8I0 201 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZSCAN4Q8NAM6 433 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR51D1Q8NGF3 324 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 BAALCQ8WXS3 180 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 APH1AQ96BI3 265 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 FAF2Q96CS3 445 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 YIPF6Q96EC8 236 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 C14orf144Q96I85 54 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 FOPNLQ96NB1 174 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 STACQ99469 402 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CABLES2Q9BTV7 478 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMED9Q9BVK6 235 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM138Q9NPI0 162 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms