RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 RNF128Q8TEB7 428 aa18.19■□□□□ 0.5
SHOX2-203ENST00000441443 ZNF285Q96NJ3 590 aa18.19■□□□□ 0.5
SHOX2-203ENST00000441443 OR8B4Q96RC9 309 aa18.19■□□□□ 0.5
SHOX2-203ENST00000441443 MMP25Q9NPA2 562 aa18.19■□□□□ 0.5
SHOX2-203ENST00000441443 MUC22E2RYF6 1773 aaPredicted RBP18.19■□□□□ 0.5
SHOX2-203ENST00000441443 SERINC4A6NH21 518 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 A6NLC8 198 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 MBTPS2O43462 519 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 RENP00797 406 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 PMP2P02689 132 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 POU2F2P09086 479 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 SPARCP09486 303 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 ADH6P28332 368 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 DRAM2Q6UX65 266 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 OR4D6Q8NGJ1 314 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 ZNF587Q96SQ5 575 aaPredicted RBP18.18■□□□□ 0.5
SHOX2-203ENST00000441443 LYRM4Q9HD34 91 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 SLC2A8Q9NY64 477 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 SEC16AO15027 2179 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 LMX1BO60663 402 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 RCC1P18754 421 aaPredicted RBP18.18■□□□□ 0.5
SHOX2-203ENST00000441443 MAOAP21397 527 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 ZNF141Q15928 474 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 PNLIPRP3Q17RR3 467 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 EEF1A1P5Q5VTE0 462 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 FIGLAQ6QHK4 219 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 ZDHHC22Q8N966 263 aa18.18■□□□□ 0.5
SHOX2-203ENST00000441443 KTI12Q96EK9 354 aaPredicted RBP18.18■□□□□ 0.5
SHOX2-203ENST00000441443 C11orf98E9PRG8 122 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 OIP5O43482 229 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 PLRG1O43660 514 aaKnown RBP18.17■□□□□ 0.5
SHOX2-203ENST00000441443 CLN5O75503 358 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 CD2P06729 351 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 S1PR1P21453 382 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 HGFACQ04756 655 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 SLC9A3R2Q15599 337 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 TMEM184AQ6ZMB5 413 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 ZNF524Q96C55 264 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 EGLN1Q9GZT9 426 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 FANCMQ8IYD8 2048 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 TRBV6-7A0A0A0MS04 114 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 SNRNP70P08621 437 aaKnown RBP18.17■□□□□ 0.5
SHOX2-203ENST00000441443 EGR4Q05215 589 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 POMZP3Q6PJE2 187 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 MARCH3Q86UD3 253 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 OR51F2Q8NH61 342 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 ADAMTS17Q8TE56 1095 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 SECTM1Q8WVN6 248 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 ARL5BQ96KC2 179 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 KLHDC3Q9BQ90 382 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 C20orf24Q9BUV8 137 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 PRR19A6NJB7 356 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 NPIPB9F8W1W9 429 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 IFNA6P05013 189 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 PI3P19957 117 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 CA13Q8N1Q1 262 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 ZNF561Q8N587 486 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 SMIM8Q96KF7 97 aa18.17■□□□□ 0.5
SHOX2-203ENST00000441443 PARP12Q9H0J9 701 aaKnown RBP18.17■□□□□ 0.5
SHOX2-203ENST00000441443 hCG_1809904A0A1W2PP81 198 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 A0A1W2PR64 198 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 A0A1W2PRV1 198 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 DBX1A6NMT0 343 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 FBXO24O75426 580 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 HTR3BO95264 441 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 EBPQ15125 230 aaKnown RBP18.16■□□□□ 0.5
SHOX2-203ENST00000441443 RPL7L1Q6DKI1 246 aaKnown RBP18.16■□□□□ 0.5
SHOX2-203ENST00000441443 CBLN3Q6UW01 205 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 FLVCR1-AS1Q8TAF5 88 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 FAM3CQ92520 227 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 KIF26BQ2KJY2 2108 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 FOXS1O43638 330 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 DNASE1L1P49184 302 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 HYAL1Q12794 435 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 ZNF260Q3ZCT1 412 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 FOXRED2Q8IWF2 684 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 ZNF679Q8IYX0 411 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 AQP3Q92482 292 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 RERGQ96A58 199 aaPredicted RBP18.16■□□□□ 0.5
SHOX2-203ENST00000441443 IP6K3Q96PC2 410 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 LMF2Q9BU23 707 aaKnown RBP18.16■□□□□ 0.5
SHOX2-203ENST00000441443 NMES1Q9C002 83 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 CACFD1Q9UGQ2 172 aa18.16■□□□□ 0.5
SHOX2-203ENST00000441443 A0A1W2PPH5 198 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 A0A1W2PQF6 199 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 LDLRAD4O15165 306 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 ASAH2BP0C7U1 165 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 GNB3P16520 340 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 AGAP20933 346 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 OR2B8PP59922 312 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 KIRREL1Q96J84 757 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 VSTM2LQ96N03 204 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 PAPOLGQ9BWT3 736 aaKnown RBP18.15■□□□□ 0.5
SHOX2-203ENST00000441443 GDF2Q9UK05 429 aaPredicted RBP18.15■□□□□ 0.5
SHOX2-203ENST00000441443 RAB27BO00194 218 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 APBB3O95704 486 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 CD5P06127 495 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 OR8U8P0C7N1 319 aa18.15■□□□□ 0.5
SHOX2-203ENST00000441443 PPM1FP49593 454 aaPredicted RBP18.15■□□□□ 0.5
SHOX2-203ENST00000441443 OR13C3Q8NGS6 347 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms