RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 GPR137Q96N19 417 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 DEFB118Q96PH6 123 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 CARS2Q9HA77 564 aaKnown RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 MSL2Q9HCI7 577 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 LANCL2Q9NS86 450 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF107Q9UII5 783 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-206ENST00000441438 PILRBQ9UKJ0 227 aa9.35□□□□□ -0.91
SYNE2-206ENST00000441438 COL1A2P08123 1366 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 A0A1W2PR48 441 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 TCRBV7S3A2A0A539 114 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 NPIPB11E5RHQ5 1161 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 MS4A18H0YCH9 400 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 KITLGP21583 273 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 CD1CP29017 333 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 APLNRP35414 380 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 FUT6P51993 359 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 RSU1Q15404 277 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 DUOXA1Q1HG43 343 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 CLLU1Q5K131 121 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 OTUD3Q5T2D3 398 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-206ENST00000441438 AVPI1Q5T686 147 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 HFE2Q6ZVN8 426 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 LILRA3Q8N6C8 439 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF420Q8TAQ5 688 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-206ENST00000441438 SLC7A13Q8TCU3 470 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 SEH1LQ96EE3 360 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 TMPRSS13Q9BYE2 586 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 ABCG5Q9H222 651 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 SLC28A3Q9HAS3 691 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 IKZF2Q9UKS7 526 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 RFNGQ9Y644 331 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 TRIP11Q15643 1979 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 USP17L23D6RBM5 183 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 MRASO14807 208 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 TRAPPC2P0DI81 140 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 TRAPPC2BP0DI82 140 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 GPR1P46091 355 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 RORCP51449 518 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 RAB5BP61020 215 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 TRAF3Q13114 568 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF846Q147U1 533 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 OR5P2Q8WZ92 322 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 CENPNQ96H22 339 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-206ENST00000441438 MS4A10Q96PG2 267 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 ZNF347Q96SE7 839 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 GPR22Q99680 433 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 MESP1Q9BRJ9 268 aa9.34□□□□□ -0.91
SYNE2-206ENST00000441438 DCAF13Q9NV06 445 aaKnown RBP9.34□□□□□ -0.91
SYNE2-206ENST00000441438 UBQLN1Q9UMX0 589 aaKnown RBP9.34□□□□□ -0.91
SYNE2-206ENST00000441438 TRAV8-7A0A075B6U6 113 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 A0A0G2JN53 185 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 CDC40O60508 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
SYNE2-206ENST00000441438 SCGNO76038 276 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 CYBAP13498 195 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 GGT2P36268 569 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 TMPRSS3P57727 454 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 SIRPAP78324 504 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 CDKL1Q00532 357 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 MST1LQ2TV78 715 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 SERTAD4-AS1Q5TG53 156 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 AMIGO2Q86SJ2 522 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 WFDC8Q8IUA0 241 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 BOLLQ8N9W6 283 aaKnown RBP9.33□□□□□ -0.92
SYNE2-206ENST00000441438 OR14L1PQ8NHC6 308 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 CASTOR1Q8WTX7 329 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 DEDD2Q8WXF8 326 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 GPATCH2LQ9NWQ4 482 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 ASB6Q9NWX5 421 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 LAMP3Q9UQV4 416 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 RNF11Q9Y3C5 154 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 ENSAO43768 121 aaKnown RBP9.33□□□□□ -0.92
SYNE2-206ENST00000441438 GNG7O60262 68 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 ENTPD6O75354 484 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 LSM8O95777 96 aaKnown RBP9.33□□□□□ -0.92
SYNE2-206ENST00000441438 P04436 131 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 SERPINE1P05121 402 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 FGF3P11487 239 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-206ENST00000441438 CRYBB2P43320 205 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 PYY3Q5JQD4 70 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 LINC00336Q6ZUF6 198 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 MAVSQ7Z434 540 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 LINC01551Q86U37 167 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 MEX3DQ86XN8 651 aaKnown RBP9.33□□□□□ -0.92
SYNE2-206ENST00000441438 OVCA2Q8WZ82 227 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 MRGPRX2Q96LB1 330 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 RDH14Q9HBH5 336 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 ADGRL4Q9HBW9 690 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 POLDIP2Q9Y2S7 368 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 A3GALT2U3KPV4 340 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 CITO14578 2027 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 TNRC18O15417 2968 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-206ENST00000441438 HTTP42858 3142 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 GXYLT2A0PJZ3 443 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 LRRC3CA6NJW4 275 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 FAM159BA6NKW6 160 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 CELP19835 753 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 GPR17Q13304 367 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 TPRG1Q6ZUI0 275 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 RNF144BQ7Z419 303 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms