RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CD1CP29017 333 aa10.55□□□□□ -0.72
SMPD4-209ENST00000439886 P2RY2P41231 377 aa10.55□□□□□ -0.72
SMPD4-209ENST00000439886 PMPCAQ10713 525 aa10.55□□□□□ -0.72
SMPD4-209ENST00000439886 COX15Q7KZN9 410 aa10.55□□□□□ -0.72
SMPD4-209ENST00000439886 LYG2Q86SG7 212 aa10.55□□□□□ -0.72
SMPD4-209ENST00000439886 SKA3Q8IX90 412 aa10.55□□□□□ -0.72
SMPD4-209ENST00000439886 JSRP1Q96MG2 331 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-209ENST00000439886 GDE1Q9NZC3 331 aa10.55□□□□□ -0.72
SMPD4-209ENST00000439886 MRPS23Q9Y3D9 190 aaKnown RBP10.55□□□□□ -0.72
SMPD4-209ENST00000439886 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
SMPD4-209ENST00000439886 EIF4E2O60573 245 aaKnown RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 OR13C7P0DN81 318 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 CD96P40200 585 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 ARFRP1Q13795 201 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 DPY19L2P2Q6ZN68 376 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 SLC16A9Q7RTY1 509 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 BHLHE23Q8NDY6 225 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 OR10D4PQ8NGN7 298 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 PIK3IP1Q96FE7 263 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 ELL3Q9HB65 397 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 INHAP05111 366 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 HOXC4P09017 264 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 NPSP0C0P6 89 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 TRA2AQ13595 282 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 VITQ6UXI7 678 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 SLC39A11Q8N1S5 342 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 KDM8Q8N371 416 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 NPRL2Q8WTW4 380 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 THOC3Q96J01 351 aaKnown RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 ASB16Q96NS5 453 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 OCSTAMPQ9BR26 566 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 FAM86C1Q9NVL1 165 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 AMDHD2Q9Y303 409 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 LSM5Q9Y4Y9 91 aaKnown RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 URB1O60287 2271 aaKnown RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 KIF26BQ2KJY2 2108 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 MSGN1A6NI15 193 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 SPINT1O43278 529 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 GLI4P10075 376 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 GNB3P16520 340 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 ZNF10P21506 573 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 HOXC12P31275 282 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 PKIAP61925 76 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 ELAVL3Q14576 367 aaKnown RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 RPL7L1Q6DKI1 246 aaKnown RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 Q6ZRG5 221 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 TMEM52Q8NDY8 209 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 LINC00615Q96LM1 132 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 PRRT1Q99946 306 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 C19orf53Q9UNZ5 99 aaPredicted RBP10.54□□□□□ -0.72
SMPD4-209ENST00000439886 MMP24Q9Y5R2 645 aa10.54□□□□□ -0.72
SMPD4-209ENST00000439886 VCANP13611 3396 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 OR4C45A6NMZ5 311 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 P2RX6O15547 441 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 SLC16A7O60669 478 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 RDH16O75452 317 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 ITGB2P05107 769 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 DEFB103AP81534 67 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 FOXO1Q12778 655 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 PPP1R3BQ86XI6 285 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 ZNF679Q8IYX0 411 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 METTL21AQ8WXB1 218 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 IP6K3Q96PC2 410 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 SERINC2Q96SA4 455 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 MMP26Q9NRE1 261 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 DAPP1Q9UN19 280 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 FBXO7Q9Y3I1 522 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 INSL6Q9Y581 213 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 TMEM212A6NML5 194 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 AP4M1O00189 453 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 SDCBPO00560 298 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-209ENST00000439886 PHOX2AO14813 284 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 OR8U8P0C7N1 319 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 OR3A2P47893 321 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 HTR5AP47898 357 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 ZNF550Q7Z398 422 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 VN1R4Q7Z5H5 301 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 MISPQ8IVT2 679 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 PRR22Q8IZ63 422 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 MFSD9Q8NBP5 474 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 NAXEQ8NCW5 288 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 OR2L8Q8NGY9 312 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 OR4C3Q8NH37 302 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 OR51F2Q8NH61 342 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 THAP3Q8WTV1 239 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-209ENST00000439886 ZNF845Q96IR2 970 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-209ENST00000439886 HHIPL1Q96JK4 782 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 SEC11CQ9BY50 192 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 TAF9BQ9HBM6 251 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 B9D1Q9UPM9 204 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 EMC9Q9Y3B6 208 aa10.53□□□□□ -0.72
SMPD4-209ENST00000439886 HRKO00198 91 aa10.52□□□□□ -0.72
SMPD4-209ENST00000439886 ZIC1Q15915 447 aa10.52□□□□□ -0.72
SMPD4-209ENST00000439886 ZNF529Q6P280 563 aa10.52□□□□□ -0.72
SMPD4-209ENST00000439886 BIVMQ86UB2 503 aa10.52□□□□□ -0.72
SMPD4-209ENST00000439886 GPX8Q8TED1 209 aa10.52□□□□□ -0.72
SMPD4-209ENST00000439886 C22orf15Q8WYQ4 148 aa10.52□□□□□ -0.72
SMPD4-209ENST00000439886 PHYHIPLQ96FC7 376 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms