RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 WISP1O95388 367 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 CRHP06850 196 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 CD79AP11912 226 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 RABIFP47224 123 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 B2MP61769 119 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 DCDP81605 110 aaKnown RBP13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 GLO1Q04760 184 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 GUCA2BQ16661 112 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 PNLIPRP3Q17RR3 467 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 METTL27Q8N6F8 245 aaPredicted RBP13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 SLC30A7Q8NEW0 376 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 ADIPOR1Q96A54 375 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 SLC25A36Q96CQ1 311 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 ATPIF1Q9UII2 106 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 OR52A1Q9UKL2 312 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 NUDT19A8MXV4 375 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 ZNF208O43345 1280 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 GMFGO60234 142 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 RORAP35398 523 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 NAAAQ02083 359 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 UNQ6126/PRO20091Q6UXV3 157 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 ZNF704Q6ZNC4 412 aaPredicted RBP13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 RHOUQ7L0Q8 258 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 PAQR4Q8N4S7 273 aaPredicted RBP13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 OR4K17Q8NGC6 315 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 TCTN2Q96GX1 697 aa13.64□□□□□ -0.23
CDC42EP4-202ENST00000439510 PCNX3Q9H6A9 2034 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 FADS1O60427 444 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 ACTL6AO96019 429 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 PSMB6P28072 239 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 CRABP1P29762 137 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 MICBQ29980 383 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 ZNF542PQ5EBM4 170 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 DHRS7BQ6IAN0 325 aaPredicted RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 GTPBP8Q8N3Z3 284 aaPredicted RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 GVQW1Q8N7I0 195 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 LOC100509620A0A075B734 347 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 ZNF98A6NK75 572 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 C17orf51A8MQB3 221 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 LMX1BO60663 402 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 ERCC1P07992 297 aaPredicted RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 TPT1P13693 172 aaKnown RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 TBPP20226 339 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 GABRA4P48169 554 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 QRFPP83859 136 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 UNC119Q13432 240 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 OR52W1Q6IF63 320 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 TMEM88Q6PEY1 159 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 HAGHLQ6PII5 290 aaPredicted RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 RAB11FIP2Q7L804 512 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 PRR22Q8IZ63 422 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 ADAD2Q8NCV1 583 aaKnown RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 FAM46BQ96A09 425 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 CNTD2Q9H8S5 307 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 FN3KRPQ9HA64 309 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 CHMP1AQ9HD42 196 aaPredicted RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 ZNF629Q9UEG4 869 aaPredicted RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 MKL2Q9ULH7 1088 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 COA3Q9Y2R0 106 aaPredicted RBP13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 SPEGQ15772 3267 aa13.63□□□□□ -0.23
CDC42EP4-202ENST00000439510 KNL1Q8NG31 2342 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 A0A1W2PQD3 144 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 PLPP3O14495 311 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 MPZL1O95297 269 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 IGKV3-11P04433 115 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 PGAM2P15259 253 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 HRH1P35367 487 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 SMAD2Q15796 467 aaKnown RBP13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 PCK2Q16822 640 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 TMEM244Q5VVB8 128 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 DTWD2Q8NBA8 298 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 ST7LQ8TDW4 575 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 CMBLQ96DG6 245 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 NMES1Q9C002 83 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 PNO1Q9NRX1 252 aaKnown RBP13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 LANCL2Q9NS86 450 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 MLXQ9UH92 298 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 NOSIPQ9Y314 301 aaKnown RBP13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 SDK1Q7Z5N4 2213 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 C10orf142B7Z368 130 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 H0YIG0 161 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 GP1BBP13224 206 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 PGCP20142 388 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 AKR1C2P52895 323 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 AKR1C1Q04828 323 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 SLC22A6Q4U2R8 563 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 MARCH3Q86UD3 253 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 SLC26A10Q8NG04 563 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 NKD1Q969G9 470 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 ARL11Q969Q4 196 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 MAP3K3Q99759 626 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 NUDT16L1Q9BRJ7 211 aaKnown RBP13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 OR8D2Q9GZM6 311 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 CSAG2Q9Y5P2 127 aa13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 TDRD6O60522 2096 aaKnown RBP13.62□□□□□ -0.23
CDC42EP4-202ENST00000439510 EEF1E1-BLOC1S5C9J1V9 151 aa13.61□□□□□ -0.23
CDC42EP4-202ENST00000439510 ALG1L2C9J202 215 aa13.61□□□□□ -0.23
CDC42EP4-202ENST00000439510 VAMP1P23763 118 aa13.61□□□□□ -0.23
CDC42EP4-202ENST00000439510 HSD11B1P28845 292 aa13.61□□□□□ -0.23
CDC42EP4-202ENST00000439510 CD1CP29017 333 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms