RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 SCN5AQ14524 2016 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 CHRM2P08172 466 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 CSF3P09919 207 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 RBP2P50120 134 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ZNF121P58317 390 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-205ENST00000439160 SHBQ15464 509 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 GAB4Q2WGN9 574 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 C17orf47Q8NEP4 570 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ZFAND1Q8TCF1 268 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ABHD5Q8WTS1 349 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 SLC7A6Q92536 515 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ZC3HAV1LQ96H79 300 aaKnown RBP11.07□□□□□ -0.64
TCOF1-205ENST00000439160 TSPAN32Q96QS1 320 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 EIF5A2Q9GZV4 153 aaKnown RBP11.07□□□□□ -0.64
TCOF1-205ENST00000439160 C20orf85Q9H1P6 137 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ZNF768Q9H5H4 540 aaKnown RBP11.07□□□□□ -0.64
TCOF1-205ENST00000439160 ADGRL4Q9HBW9 690 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 GLTPQ9NZD2 209 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 LRP12Q9Y561 859 aa11.07□□□□□ -0.64
TCOF1-205ENST00000439160 C4orf51C9J302 202 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 E9PI62 339 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 PCK2Q16822 640 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 HES3Q5TGS1 186 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 WDR88Q6ZMY6 472 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 VWCEQ96DN2 955 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 SLCO5A1Q9H2Y9 848 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 PILRAQ9UKJ1 303 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 IMPA2O14732 288 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 SIX6O95475 246 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 UBBP0CG47 229 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 SPNP16150 400 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 CTLA4P16410 223 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 ANXA7P20073 488 aaKnown RBP11.06□□□□□ -0.64
TCOF1-205ENST00000439160 CRYBB2P43320 205 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 EIF3IQ13347 325 aaKnown RBP11.06□□□□□ -0.64
TCOF1-205ENST00000439160 FBXW12Q6X9E4 464 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 COMTD1Q86VU5 262 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 PLPP5Q8NEB5 264 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 OR11G2Q8NGC1 345 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 OR2Y1Q8NGV0 311 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 TRPM7Q96QT4 1865 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 ACTL6BO94805 426 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 CTSBP07858 339 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 POU3F3P20264 500 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-205ENST00000439160 ASAH1Q13510 395 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 TBC1D28Q2M2D7 210 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 TIGD3Q6B0B8 471 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 SLC25A45Q8N413 288 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 NOXO1Q8NFA2 376 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 MOB1AQ9H8S9 216 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 UCK1Q9HA47 277 aa11.06□□□□□ -0.64
TCOF1-205ENST00000439160 TCRBV16S1A1N1A0A5B0 115 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 PDGFBP01127 241 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-205ENST00000439160 GLI4P10075 376 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 TRIP6Q15654 476 aaKnown RBP11.05□□□□□ -0.64
TCOF1-205ENST00000439160 PMS2CLQ68D20 193 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 TRILQ7L0X0 811 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 PRSS42Q7Z5A4 293 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 NUDCD2Q8WVJ2 157 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 SARAFQ96BY9 339 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 TM4SF19Q96DZ7 209 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 TSNAXQ99598 290 aaKnown RBP11.05□□□□□ -0.64
TCOF1-205ENST00000439160 POM121CA8CG34 1229 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 ZNF780AO75290 641 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-205ENST00000439160 SLC25A1P53007 311 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 MZT1Q08AG7 82 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 ETFDHQ16134 617 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 BCL2A1Q16548 175 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 ACTBL2Q562R1 376 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 AUNIPQ9H7T9 357 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 ZFP57Q9NU63 452 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 RER1O15258 196 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 GCM2O75603 506 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-205ENST00000439160 PTBP1P26599 531 aaKnown RBP eCLIP11.05□□□□□ -0.64
TCOF1-205ENST00000439160 CAMLGP49069 296 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 TAF9Q16594 264 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 LILRB2Q8N423 598 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 OR52H1Q8NGJ2 320 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 OR51F2Q8NH61 342 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 NUBPLQ8TB37 319 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 MED18Q9BUE0 208 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 PLSCR3Q9NRY6 295 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 GREB1Q4ZG55 1949 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 AGPAT2O15120 278 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 KLK10O43240 276 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 MPZL1O95297 269 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 BPNT1O95861 308 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 LPLP06858 475 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 FGF9P31371 208 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-205ENST00000439160 WDR38Q5JTN6 314 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-205ENST00000439160 SRRQ9GZT4 340 aa11.05□□□□□ -0.64
TCOF1-205ENST00000439160 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 PIGBOS1A0A0B4J2F0 54 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 CD300LBA8K4G0 201 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 EFSO43281 561 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 FAHP16930 419 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 LSMEM1Q8N8F7 131 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 PTP4A1Q93096 173 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 UFSP2Q9NUQ7 469 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms