RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 NEIL1Q96FI4 390 aaPredicted RBP9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 FAM46AQ96IP4 442 aaKnown RBP9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 HSH2DQ96JZ2 352 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 NUAK2Q9H093 628 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 GID8Q9NWU2 228 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PTTG3PQ9NZH4 202 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 AP3M1Q9Y2T2 418 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ENPP4Q9Y6X5 453 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 IGLV1-36A0A0B4J1U3 117 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 LOC100653049A0A140TA62 436 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 C22orf46C9J442 243 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 F5H5P2 479 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CXCR6O00574 342 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 NME4O00746 187 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 HOXA3O43365 443 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 KRT34O76011 436 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PSMB10P40306 273 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PITPNBP48739 271 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 RELBQ01201 579 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 DEFA6Q01524 100 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 LIPEQ05469 1076 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 MAB21L1Q13394 359 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 MEP1BQ16820 701 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CLEC12AQ5QGZ9 265 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 FAM201AQ5SY85 155 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 WDR25Q64LD2 544 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PGM2L1Q6PCE3 622 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 DCDC5Q6ZRR9 648 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SPATC1Q76KD6 591 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 NLRC3Q7RTR2 1065 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 MOGAT3Q86VF5 341 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 OR8B3Q8NGG8 313 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 OR5L1Q8NGL2 311 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 OR10S1Q8NGN2 331 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 TMIGD2Q96BF3 282 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 RCN3Q96D15 328 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PLEKHA8Q96JA3 519 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 DHRS1Q96LJ7 313 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ZNF582Q96NG8 517 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 OR8B2Q96RD0 313 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 FUZQ9BT04 418 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CDADC1Q9BWV3 514 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 NDEL1Q9GZM8 345 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PNRC2Q9NPJ4 139 aaKnown RBP9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 FGFR1OP2Q9NVK5 253 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 NDUFAF4Q9P032 175 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CAPN7Q9Y6W3 813 aa9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PRKDCP78527 4128 aaKnown RBP9.12□□□□□ -0.95
SPTLC1P4-201ENST00000435997 A0A1B0GUS0 222 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 LRRC30A6NM36 301 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SOCS2O14508 198 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PPP1R3DO95685 299 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ZNF682O95780 498 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 GPANK1O95872 356 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SERPINA1P01009 418 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 TROVE2P10155 538 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 MMP9P14780 707 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CD200P41217 278 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CDKN2AP42771 156 aaKnown RBP9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 BPIFB3P59826 476 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SEC23BQ15437 767 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 DEFB112Q30KQ8 113 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SLC18B1Q6NT16 456 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 BRD3OSQ6XYD6 125 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 DPY19L2P2Q6ZN68 376 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CFAP77Q6ZQR2 320 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 C1orf87Q8N0U7 546 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 TMEM86BQ8N661 226 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 BHLHE23Q8NDY6 225 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 GJC3Q8NFK1 279 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SLC26A10Q8NG04 563 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ERGIC1Q969X5 290 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 RSRC1Q96IZ7 334 aaKnown RBP9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 TSSK2Q96PF2 358 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 NUDT16L1Q9BRJ7 211 aaKnown RBP9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ARMCX1Q9P291 453 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CTSZQ9UBR2 303 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CLN8Q9UBY8 286 aa9.11□□□□□ -0.95
SPTLC1P4-201ENST00000435997 TRBV4-1A0A0J9YWV2 114 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 IGHV3-64DA0A0J9YX35 117 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ENSAO43768 121 aaKnown RBP9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SASH3O75995 380 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 NDUFA7O95182 113 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 HLA-DPB1P04440 258 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 H1F0P07305 194 aaKnown RBP9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ACSM4P0C7M7 580 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 H2AFXP16104 143 aaPredicted RBP9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 FPR3P25089 353 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CRABP1P29762 137 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 GGT2P36268 569 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 GSK3BP49841 420 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SLC7A2P52569 658 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PRSS12P56730 875 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 FGF12P61328 243 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 GK2Q14410 553 aaPredicted RBP9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ZNF362Q5T0B9 420 aaPredicted RBP9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CORO6Q6QEF8 472 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 LYPD2Q6UXB3 125 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 Q6YL49 198 aa9.1□□□□□ -0.95
SPTLC1P4-201ENST00000435997 HDXQ7Z353 690 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms