RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 SLC16A7O60669 478 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 RPL4P36578 427 aaKnown RBP11.27□□□□□ -0.61
LINC00028-201ENST00000435497 RGS6P49758 472 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 PROK1P58294 105 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 HIST1H3AP68431 136 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 TAF9Q16594 264 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 LRRC23Q53EV4 343 aaPredicted RBP11.27□□□□□ -0.61
LINC00028-201ENST00000435497 CLEC12AQ5QGZ9 265 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 HIST2H3PS2Q5TEC6 136 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 ERICH5Q6P6B1 374 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 COLCA1Q6ZS62 124 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 HIST2H3AQ71DI3 136 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 RNF113BQ8IZP6 322 aaKnown RBP11.27□□□□□ -0.61
LINC00028-201ENST00000435497 OFCC1Q8IZS5 231 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 C1orf87Q8N0U7 546 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 Q8TCH9 128 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 APOBEC3DQ96AK3 386 aaPredicted RBP11.27□□□□□ -0.61
LINC00028-201ENST00000435497 SH3GL1Q99961 368 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 RERGLQ9H628 205 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 CTSZQ9UBR2 303 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 ATPIF1Q9UII2 106 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 TMCC3Q9ULS5 477 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 POMT1Q9Y6A1 747 aa11.27□□□□□ -0.61
LINC00028-201ENST00000435497 ZNF879B4DU55 563 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 P2RY10O00398 339 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 XKRYO14609 159 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 ENSAO43768 121 aaKnown RBP11.26□□□□□ -0.61
LINC00028-201ENST00000435497 GPR137BO60478 399 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 FAM20BO75063 409 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 PTP4A3O75365 173 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 KHDRBS3O75525 346 aaKnown RBP11.26□□□□□ -0.61
LINC00028-201ENST00000435497 FCN3O75636 299 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 TSPAN15O95858 294 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 FPR3P25089 353 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 GPR4P46093 362 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 RAD23AP54725 363 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 TRAM2Q15035 370 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 MPPED2Q15777 294 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 KCNMB1Q16558 191 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 ZBED5Q49AG3 693 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 TTMPQ5BVD1 217 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 PTCHD4Q6ZW05 846 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 TMPRSS11FQ6ZWK6 438 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 VTCN1Q7Z7D3 282 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 GLB1L2Q8IW92 636 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 SSMEM1Q8WWF3 244 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 DYRK2Q92630 601 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 ZNF570Q96NI8 536 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 FNDC11Q9BVV2 318 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 NUAK2Q9H093 628 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 SYT4Q9H2B2 425 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 NMNAT1Q9HAN9 279 aaPredicted RBP11.26□□□□□ -0.61
LINC00028-201ENST00000435497 VSX1Q9NZR4 365 aaPredicted RBP11.26□□□□□ -0.61
LINC00028-201ENST00000435497 GMPR2Q9P2T1 348 aaKnown RBP11.26□□□□□ -0.61
LINC00028-201ENST00000435497 LHFPL6Q9Y693 200 aa11.26□□□□□ -0.61
LINC00028-201ENST00000435497 SLC22A31A6NKX4 558 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 TOX4O94842 621 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 IGHV4-59P01825 116 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 CD200P41217 278 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 RPL15P61313 204 aaKnown RBP11.25□□□□□ -0.61
LINC00028-201ENST00000435497 KRR1Q13601 381 aaKnown RBP11.25□□□□□ -0.61
LINC00028-201ENST00000435497 PDCD1Q15116 288 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 MEP1BQ16820 701 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 KRTAP27-1Q3LI81 207 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 PRAMEF6Q5VXH4 476 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 CORO6Q6QEF8 472 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 MBOAT2Q6ZWT7 520 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 NAA40Q86UY6 237 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 CELF2-AS1Q8N7Q2 184 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 TBC1D15Q8TC07 691 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 ACOT11Q8WXI4 607 aaPredicted RBP11.25□□□□□ -0.61
LINC00028-201ENST00000435497 GATAD2BQ8WXI9 593 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 UBE2FQ969M7 185 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 ERGIC1Q969X5 290 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 WDFY2Q96P53 400 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 COQ7Q99807 217 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 SIRPDQ9H106 197 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 RASSF4Q9H2L5 321 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 NRIP3Q9NQ35 241 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 UFSP2Q9NUQ7 469 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 ACOXLQ9NUZ1 547 aa11.25□□□□□ -0.61
LINC00028-201ENST00000435497 IGHV1-69DA0A0B4J2H0 117 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 FAM220BPB1ANY3 271 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 DCTN6O00399 190 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 NPPAP01160 153 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 IGHV1-69P01742 117 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 LIPFP07098 398 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 IRF2P14316 349 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 SDHAP31040 664 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 IFNA8P32881 189 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 CDKN2AP42771 156 aaKnown RBP11.24□□□□□ -0.61
LINC00028-201ENST00000435497 IER3P46695 156 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 NPY4RP50391 375 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 FXYD6P3P58550 94 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 DBPQ10586 325 aaPredicted RBP11.24□□□□□ -0.61
LINC00028-201ENST00000435497 GK2Q14410 553 aaPredicted RBP11.24□□□□□ -0.61
LINC00028-201ENST00000435497 METTL21CQ5VZV1 264 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 CD276Q5ZPR3 534 aa11.24□□□□□ -0.61
LINC00028-201ENST00000435497 SFRP4Q6FHJ7 346 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms