RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 EMC6Q9BV81 110 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 B3GNT4Q9C0J1 378 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 WDR54Q9H977 334 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 RYDENQ9NUL5 291 aaKnown RBP9.27□□□□□ -0.92
CD44-210ENST00000434472 MED9Q9NWA0 146 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 KCNN3Q9UGI6 736 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 PLEKHA6Q9Y2H5 1048 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 RHBDD3Q9Y3P4 386 aa9.27□□□□□ -0.92
CD44-210ENST00000434472 EXPH5Q8NEV8 1989 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 ZNF726A6NNF4 738 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 SIGLEC6O43699 453 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 TRAF3IP2O43734 574 aaPredicted RBP9.27□□□□□ -0.93
CD44-210ENST00000434472 OR2J2O76002 312 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 ZNF735P0CB33 412 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 FGF5P12034 268 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 M6PRP20645 277 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 AGTR1P30556 359 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 CALCRP30988 508 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 P2RY4P51582 365 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 ARPC4P59998 168 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 HLXQ14774 488 aaPredicted RBP9.27□□□□□ -0.93
CD44-210ENST00000434472 AANATQ16613 207 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 RNASE10Q5GAN6 216 aaKnown RBP9.27□□□□□ -0.93
CD44-210ENST00000434472 NHLRC3Q5JS37 347 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 MRPL14Q6P1L8 145 aaKnown RBP9.27□□□□□ -0.93
CD44-210ENST00000434472 ZNF529Q6P280 563 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 TMEM81Q6P7N7 255 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 WDFY1Q8IWB7 410 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 GALNT16Q8N428 558 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 ZDHHC22Q8N966 263 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 OR10G3Q8NGC4 313 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 OR1J2Q8NGS2 313 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 SAP25Q8TEE9 199 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 SCARB1Q8WTV0 552 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 OR5B2Q96R09 309 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 TINAGL1Q9GZM7 467 aaPredicted RBP9.27□□□□□ -0.93
CD44-210ENST00000434472 CNTD2Q9H8S5 307 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 KLK13Q9UKR3 277 aa9.27□□□□□ -0.93
CD44-210ENST00000434472 REV3LO60673 3130 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 ADAMTS9Q9P2N4 1935 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 FXYD6-FXYD2A0A087WZ82 144 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 LOC102723996A0A087X1L8 192 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 LY6G6EA0A0G2JKS1 128 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 AQP7P3A6NL99 342 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 RFPL4AA6NLU0 287 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 SHISA8B8ZZ34 492 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 RFPL4AL1F8VTS6 287 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 I3L521 148 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 M0QYG6 137 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 MEN1O00255 615 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 LMX1BO60663 402 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 DKK1O94907 266 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 SIX6O95475 246 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 CFDP00746 253 aaPredicted RBP9.26□□□□□ -0.93
CD44-210ENST00000434472 UBBP0CG47 229 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 RPA2P15927 270 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 ZNF43P17038 809 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 HOXA6P31267 233 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 EIF1AXP47813 144 aaKnown RBP9.26□□□□□ -0.93
CD44-210ENST00000434472 H2BFSP57053 126 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 GRB2P62993 217 aaKnown RBP9.26□□□□□ -0.93
CD44-210ENST00000434472 GABREP78334 506 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 SRSF4Q08170 494 aaKnown RBP9.26□□□□□ -0.93
CD44-210ENST00000434472 IL11RAQ14626 422 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 CDNFQ49AH0 187 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 ATPAF1Q5TC12 328 aaPredicted RBP9.26□□□□□ -0.93
CD44-210ENST00000434472 LIN54Q6MZP7 749 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 OPN5Q6U736 354 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 TRAPPC6BQ86SZ2 158 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 FJX1Q86VR8 437 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 ACBD4Q8NC06 268 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 CHST4Q8NCG5 386 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 OR10S1Q8NGN2 331 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 LRRC20Q8TCA0 184 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 ELP5Q8TE02 316 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 RASL10BQ96S79 203 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 FXYD6Q9H0Q3 95 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 SEC61A2Q9H9S3 476 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 IFT46Q9NQC8 304 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 NUP50Q9UKX7 468 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 SIT1Q9Y3P8 196 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 LHFPL6Q9Y693 200 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 U3KQA8 63 aa9.26□□□□□ -0.93
CD44-210ENST00000434472 GON4LQ3T8J9 2241 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 FER1L5A0AVI2 2057 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 A0A1B0GTI1 187 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 LOC101059948A0A1B0GTJ6 334 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 A0A1B0GW55 424 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 TMEM14DPA8MWL7 114 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 RAB27BO00194 218 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 ARPC5O15511 151 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 SLC34A2O95436 690 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 DUX4L2P0CJ85 424 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 DUX4L3P0CJ86 424 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 DUX4L4P0CJ87 422 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 DUX4L5P0CJ88 424 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 DUX4L6P0CJ89 424 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 DUX4L7P0CJ90 424 aa9.25□□□□□ -0.93
CD44-210ENST00000434472 CCL1P22362 96 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms