RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 MAGP20916 626 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 CD9P21926 228 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 CMA1P23946 247 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 FOXN2P32314 431 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 NUDT1P36639 197 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 GPR4P46093 362 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 CCR6P51684 374 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 NDUFA8P51970 172 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 UBE2KP61086 200 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 SLC7A9P82251 487 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 SMARCB1Q12824 385 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 OR7A5Q15622 319 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 RSPO1Q2MKA7 263 aaPredicted RBP1.81□□□□□ -2.12
PTPN4-205ENST00000433888 TPTE2P1Q5T6R2 138 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 METTL11BQ5VVY1 283 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 ZNF493Q6ZR52 646 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 TMEM150AQ86TG1 271 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 HORMAD1Q86X24 394 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 FAM71AQ8IYT1 594 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 VKORC1L1Q8N0U8 176 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 STPG2Q8N412 459 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 SUMF2Q8NBJ7 301 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 OR52E2Q8NGJ4 325 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 LILRB4Q8NHJ6 448 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 MITD1Q8WV92 249 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 RPEQ96AT9 228 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 RNF170Q96K19 258 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 JSRP1Q96MG2 331 aaPredicted RBP1.81□□□□□ -2.12
PTPN4-205ENST00000433888 LZTS2Q9BRK4 669 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 UTP23Q9BRU9 249 aaKnown RBP1.81□□□□□ -2.12
PTPN4-205ENST00000433888 BBS2Q9BXC9 721 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 SLC17A9Q9BYT1 436 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 OR11A1Q9GZK7 315 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 TDRD3Q9H7E2 651 aaKnown RBP1.81□□□□□ -2.12
PTPN4-205ENST00000433888 TREM1Q9NP99 234 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 FBXO8Q9NRD0 319 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 NRBP2Q9NSY0 501 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 MCUBQ9NWR8 336 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 SLC39A1Q9NY26 324 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 SLC25A37Q9NYZ2 338 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 ADA2Q9NZK5 511 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 IFNKQ9P0W0 207 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 NEUROG3Q9Y4Z2 214 aa1.81□□□□□ -2.12
PTPN4-205ENST00000433888 A0A1B0GW15 77 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 RAB19A4D1S5 217 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 OR6C74A6NCV1 312 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 A6NDX4 124 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 SLC22A20A6NK97 555 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 LYRM9A8MSI8 78 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 RFXANKO14593 260 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 SPOPO43791 374 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 SC5DO75845 299 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 ETHE1O95571 254 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 C6orf47O95873 294 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 KLK1P06870 262 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 DCNP07585 359 aaKnown RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 PLEKP08567 350 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 PGA4P0DJD7 388 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 PGA3P0DJD8 388 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 IGHV3-43DP0DP04 118 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 RCC1P18754 421 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 RAB4AP20338 218 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 USF1P22415 310 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 IL32P24001 234 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 DEKP35659 375 aaKnown RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 CEACAM6P40199 344 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 CDKN2BP42772 138 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 ZNF138P52744 262 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 UGT2B15P54855 530 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 RBMY1FQ15415 496 aaKnown RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 HSP90AA4PQ58FG1 418 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 LIN9Q5TKA1 542 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 STUMQ69YW2 141 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 FRMPD2BQ6IN97 320 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 H3F3CQ6NXT2 135 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 CEMP1Q6PRD7 247 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 DEGS2Q6QHC5 323 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 LINC00336Q6ZUF6 198 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 TMEM179Q6ZVK1 233 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 MBOAT2Q6ZWT7 520 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 NDUFAF7Q7L592 441 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 SELENOHQ8IZQ5 122 aaKnown RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 Q8N9W7 124 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 WDR31Q8NA23 367 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 DUSP18Q8NEJ0 188 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 OR51G1Q8NGK1 321 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 OR1N2Q8NGR9 330 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 OR13C9Q8NGT0 318 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 OR2A1Q8NGT9 310 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 OR2G3Q8NGZ4 309 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 NDNFQ8TB73 568 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 LRRC20Q8TCA0 184 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 BLOC1S5Q8TDH9 187 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 AURKBQ96GD4 344 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 C9orf72Q96LT7 481 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 RNF145Q96MT1 663 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 OPALINQ96PE5 141 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 FRMD8P1Q9BZ68 369 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 PLA2G2FQ9BZM2 168 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 TM6SF2Q9BZW4 377 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms