RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 PLPP2O43688 288 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 DBHP09172 617 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 AGAP20933 346 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 STOMP27105 288 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 APEX1P27695 318 aaKnown RBP23.02■■□□□ 1.28
TMEM248-205ENST00000433271 CCKARP32238 428 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 ALKBH1Q13686 389 aaKnown RBP23.02■■□□□ 1.28
TMEM248-205ENST00000433271 ZNF283Q8N7M2 679 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 FAM169BQ8N8A8 192 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 MUCL1Q96DR8 90 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 SMIM19Q96E16 107 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 FAM206AQ9NX38 181 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 RTTNQ86VV8 2226 aa23.02■■□□□ 1.28
TMEM248-205ENST00000433271 LOC110117498-PIK3R3F6TDL0 507 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 M0R135 149 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 ZNF14P17017 642 aaPredicted RBP23.01■■□□□ 1.27
TMEM248-205ENST00000433271 CX3CR1P49238 355 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 CCR9P51686 369 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 TPTEP56180 551 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 MFGE8Q08431 387 aaPredicted RBP23.01■■□□□ 1.27
TMEM248-205ENST00000433271 ZNF544Q6NX49 715 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 XKRXQ6PP77 449 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 YIPF6Q96EC8 236 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 ZNF799Q96GE5 643 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 DOK1Q99704 481 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 KCNJ16Q9NPI9 418 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 NDUFB11Q9NX14 153 aa23.01■■□□□ 1.27
TMEM248-205ENST00000433271 IGKV3-15P01624 115 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 CD1AP06126 327 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 CD36P16671 472 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 ARL9Q6T311 187 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 DRAM2Q6UX65 266 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 CATSPERDQ86XM0 798 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 PRSS35Q8N3Z0 413 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 RNASE6Q93091 150 aaKnown RBP23■■□□□ 1.27
TMEM248-205ENST00000433271 LRRC46Q96FV0 321 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 C4orf45Q96LM5 186 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 LOC100509620A0A075B734 347 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 DPPA5A6NC42 116 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 NKX2-6A6NCS4 301 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 ACOD1A6NK06 481 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 AGFG2O95081 481 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 ACSM4P0C7M7 580 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 TGFBR2P37173 567 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 ZNF121P58317 390 aaPredicted RBP23■■□□□ 1.27
TMEM248-205ENST00000433271 SLC3A1Q07837 685 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 CDSNQ15517 529 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 TAB1Q15750 504 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 IL17RDQ8NFM7 739 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 POM121L2Q96KW2 1035 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 BRD7Q9NPI1 651 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 G6PC2Q9NQR9 355 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 BATF3Q9NR55 127 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 CRNNQ9UBG3 495 aaPredicted RBP23■■□□□ 1.27
TMEM248-205ENST00000433271 OR52A1Q9UKL2 312 aa23■■□□□ 1.27
TMEM248-205ENST00000433271 ZG16O60844 167 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 CD53P19397 219 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 APLNRP35414 380 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 SLC6A9P48067 706 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 GDI2P50395 445 aaKnown RBP22.99■■□□□ 1.27
TMEM248-205ENST00000433271 WDR38Q5JTN6 314 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 SSX8Q7RTT4 187 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 PRSS45Q7RTY3 260 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 GHSRQ92847 366 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 MS4A3Q96HJ5 214 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 PGLYRP3Q96LB9 341 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 MOB1AQ9H8S9 216 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 GTF2A1LQ9UNN4 478 aa22.99■■□□□ 1.27
TMEM248-205ENST00000433271 C5orf49A4QMS7 147 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 OR4C45A6NMZ5 311 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 ZFPL1O95159 310 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 PPP3CBP16298 524 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 KIR3DL2P43630 455 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 IDH3GP51553 393 aaPredicted RBP22.98■■□□□ 1.27
TMEM248-205ENST00000433271 PPA1Q15181 289 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 NAA40Q86UY6 237 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 SLC30A7Q8NEW0 376 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 ITLN2Q8WWU7 325 aaPredicted RBP22.98■■□□□ 1.27
TMEM248-205ENST00000433271 DCLRE1CQ96SD1 692 aaKnown RBP22.98■■□□□ 1.27
TMEM248-205ENST00000433271 FUNDC2Q9BWH2 189 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 C1QTNF6Q9BXI9 259 aa22.98■■□□□ 1.27
TMEM248-205ENST00000433271 TMEM212A6NML5 194 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 GPRIN2O60269 458 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 IGLV1-44P01699 117 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 GABRA5P31644 462 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 BCL2L15Q5TBC7 163 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 ZNF808Q8N4W9 903 aaPredicted RBP22.97■■□□□ 1.27
TMEM248-205ENST00000433271 OR5AK2Q8NH90 309 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 PDCD1LG2Q9BQ51 273 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 PBOV1Q9GZY1 135 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 NUFIP1Q9UHK0 495 aaKnown RBP22.97■■□□□ 1.27
TMEM248-205ENST00000433271 SLC22A13Q9Y226 551 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 SF3B6Q9Y3B4 125 aaKnown RBP22.97■■□□□ 1.27
TMEM248-205ENST00000433271 ANXA2P07355 339 aaKnown RBP22.97■■□□□ 1.27
TMEM248-205ENST00000433271 CELA3BP08861 270 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 SLC2A1P11166 492 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 GPR107Q5VW38 600 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 ELMOD2Q8IZ81 293 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 PPP1R14AQ96A00 147 aa22.97■■□□□ 1.27
TMEM248-205ENST00000433271 RALYQ9UKM9 306 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms