RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PPIHO43447 177 aaKnown RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 PRKAB2O43741 272 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 CHST1O43916 411 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 SLC19A2O60779 497 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 TOM1O60784 492 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 RAMP3O60896 148 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 CTNSO60931 367 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 GATBO75879 557 aaKnown RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 LDOC1O95751 146 aaPredicted RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 TIMP1P01033 207 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 OXTP01178 125 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 JCHAINP01591 159 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 TCRBP04435 133 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 P04436 131 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 IFNW1P05000 195 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 HBQ1P09105 142 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 PSMC3P17980 439 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 BCKDHBP21953 392 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 ME2P23368 584 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 ADORA2BP29275 332 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 IDH2P48735 452 aaKnown RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 XKP51811 444 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 PKNOX1P55347 436 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 CLDN18P56856 261 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 PSPHP78330 225 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 MRPS22P82650 360 aaKnown RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 MRPS6P82932 125 aaKnown RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 KLRC3Q07444 240 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 EGFEM1PQ0D2K5 195 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 TPBGQ13641 420 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 FLOT2Q14254 428 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 SMCO1Q147U7 214 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 ZNHIT3Q15649 155 aaPredicted RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 UBE2V2Q15819 145 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 GUK1Q16774 197 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 CCDC58Q4VC31 144 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 SAMD4BQ5PRF9 694 aaKnown RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 METTL21CQ5VZV1 264 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 ULK3Q6PHR2 472 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 CYS1Q717R9 158 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 ASCL5Q7RTU5 278 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 PGAM4Q8N0Y7 254 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 C8orf31Q8N9H6 132 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 OR4K2Q8NGD2 314 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 OR52I1Q8NGK6 324 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 DYNC2LI1Q8TCX1 351 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 CXorf40AQ8TE69 158 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 RNF133Q8WVZ7 376 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 TMEM239Q8WW34 195 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 C22orf15Q8WYQ4 148 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 PINX1Q96BK5 328 aaKnown RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 S100PBPQ96BU1 408 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 UPRTQ96BW1 309 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 TIMD4Q96H15 378 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 PRAP1Q96NZ9 151 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 COPS4Q9BT78 406 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 ZNF426Q9BUY5 554 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 SLC25A51Q9H1U9 297 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 OR51B5Q9H339 312 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 TRABDQ9H4I3 376 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 SMYD3Q9H7B4 428 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 HRASLSQ9HDD0 168 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 PLEKHJ1Q9NW61 149 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 USE1Q9NZ43 259 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 IL36GQ9NZH8 169 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 OR1A1Q9P1Q5 309 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 CLN8Q9UBY8 286 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 OPN4Q9UHM6 478 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 NDRG2Q9UN36 371 aaKnown RBP2.05□□□□□ -2.08
CLK1-204ENST00000432425 GMPPBQ9Y5P6 360 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 NUP155O75694 1391 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 MTUS2Q5JR59 1369 aa2.05□□□□□ -2.08
CLK1-204ENST00000432425 PTPRGP23470 1445 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SCN2AQ99250 2005 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SMIM28A0A1B0GU29 152 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 TMEM213A2RRL7 107 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SAGE2PA6NJ88 616 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 ZNF98A6NK75 572 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 USP27XA6NNY8 438 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 MIF4GDA9UHW6 222 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 LINC00587B1AMM8 73 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 CCRL2O00421 344 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 CASKO14936 926 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 TM9SF1O15321 606 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 BIRC5O15392 142 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 NUPL2O15504 423 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 TPST2O60704 377 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 NOS1APO75052 506 aaPredicted RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 N4BP1O75113 896 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 MED6O75586 246 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SCRG1O75711 98 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 ZMPSTE24O75844 475 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SCGNO76038 276 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SRP72O76094 671 aaKnown RBP2.04□□□□□ -2.08
CLK1-204ENST00000432425 SUPT7LO94864 414 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 UTS2O95399 124 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 SERPINA1P01009 418 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 ALDOBP05062 364 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 GUSBP08236 651 aa2.04□□□□□ -2.08
CLK1-204ENST00000432425 HSPD1P10809 573 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms