RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 BHLHE23Q8NDY6 225 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 OR56B2PQ8NGI1 322 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 OR13F1Q8NGS4 319 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 CXorf40AQ8TE69 158 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 PYDC1Q8WXC3 89 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 GTF2H4Q92759 462 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 KLK6Q92876 244 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 RPL3LQ92901 407 aaKnown RBP3.37□□□□□ -1.87
HMGB3-203ENST00000430118 ART4Q93070 314 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 LHX4Q969G2 390 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 TMIGD2Q96BF3 282 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 LRRC39Q96DD0 335 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 COQ2Q96H96 371 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 TPD52L3Q96J77 140 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 CNBD2Q96M20 576 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 ZNF285Q96NJ3 590 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 CYTH2Q99418 400 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 APOL4Q9BPW4 351 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 APOOQ9BUR5 198 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 DUSP16Q9BY84 665 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 PARLQ9H300 379 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 FAM96AQ9H5X1 160 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 NT5DC2Q9H857 520 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 CYP3A43Q9HB55 503 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 BIN3Q9NQY0 253 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 ZNF275Q9NSD4 429 aaPredicted RBP3.37□□□□□ -1.87
HMGB3-203ENST00000430118 DCAF13Q9NV06 445 aaKnown RBP3.37□□□□□ -1.87
HMGB3-203ENST00000430118 BFARQ9NZS9 450 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 PIPOXQ9P0Z9 390 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 CHRNA9Q9UGM1 479 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 PCYOX1Q9UHG3 505 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 KLHL21Q9UJP4 597 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 PRPF19Q9UMS4 504 aaKnown RBP3.37□□□□□ -1.87
HMGB3-203ENST00000430118 RPH3ALQ9UNE2 315 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 GSTK1Q9Y2Q3 226 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 LRP12Q9Y561 859 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 ZFC3H1O60293 1989 aaKnown RBP3.37□□□□□ -1.87
HMGB3-203ENST00000430118 NUMA1Q14980 2115 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 ZNF106Q9H2Y7 1883 aaKnown RBP3.37□□□□□ -1.87
HMGB3-203ENST00000430118 CELSR2Q9HCU4 2923 aa3.37□□□□□ -1.87
HMGB3-203ENST00000430118 CRYBG3Q68DQ2 2970 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 CELSR1Q9NYQ6 3014 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 F8P00451 2351 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 TRBV5-4A0A0C4DH59 114 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 A0A1B0GUH1 482 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 MFSD2BA6NFX1 497 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 HHLA1C9JL84 531 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 I3L521 148 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 GPR171O14626 319 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 SLC31A2O15432 143 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 TPST2O60704 377 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 SCGNO76038 276 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 SLC22A5O76082 557 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 KCNK2O95069 426 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 CTDNEP1O95476 244 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 NSA2O95478 260 aaKnown RBP3.36□□□□□ -1.87
HMGB3-203ENST00000430118 TNFP01375 233 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 IFNA10P01566 189 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 IFNGP01579 166 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 FGGP02679 453 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 C1QBP02746 253 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 SERPINA6P08185 405 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 COX5BP10606 129 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 CPN1P15169 458 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 SPI1P17947 270 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 TSPAN8P19075 237 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 TCN1P20061 433 aaPredicted RBP3.36□□□□□ -1.87
HMGB3-203ENST00000430118 PRKACGP22612 351 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 BMI1P35226 326 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 RORAP35398 523 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 SAA4P35542 130 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 CD79BP40259 229 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 MAGEA1P43355 309 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 TMEM50BP56557 158 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 IFITM3Q01628 133 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 GNA12Q03113 381 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 GLO1Q04760 184 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 ADIGQ0VDE8 80 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 STX4Q12846 297 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 EIF2B1Q14232 305 aaKnown RBP3.36□□□□□ -1.87
HMGB3-203ENST00000430118 FLOT2Q14254 428 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 GANABQ14697 944 aaKnown RBP3.36□□□□□ -1.87
HMGB3-203ENST00000430118 PON3Q15166 354 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 SSX2Q16385 188 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 HADHQ16836 314 aaKnown RBP3.36□□□□□ -1.87
HMGB3-203ENST00000430118 KNOP1Q1ED39 458 aaKnown RBP3.36□□□□□ -1.87
HMGB3-203ENST00000430118 UNC50Q53HI1 259 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 C2CD6Q53TS8 623 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 MS4A13Q5J8X5 152 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 CLLU1Q5K131 121 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 MUC21Q5SSG8 566 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 DNLZQ5SXM8 178 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 FAM182AQ5T1J6 154 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 BSPRYQ5W0U4 402 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 LPCAT4Q643R3 524 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 WDR25Q64LD2 544 aaPredicted RBP3.36□□□□□ -1.87
HMGB3-203ENST00000430118 NPSR1Q6W5P4 371 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 FAM122BQ7Z309 247 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 DPY19L4Q7Z388 723 aa3.36□□□□□ -1.87
HMGB3-203ENST00000430118 NUFIP2Q7Z417 695 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms