RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 VAMP1P23763 118 aa13.43□□□□□ -0.26
LINC00839-202ENST00000429940 CRABP1P29762 137 aa13.43□□□□□ -0.26
LINC00839-202ENST00000429940 POLR2HP52434 150 aaKnown RBP13.43□□□□□ -0.26
LINC00839-202ENST00000429940 SLC22A6Q4U2R8 563 aa13.43□□□□□ -0.26
LINC00839-202ENST00000429940 CCDC157Q569K6 752 aa13.43□□□□□ -0.26
LINC00839-202ENST00000429940 C1orf140Q5VVS0 124 aa13.43□□□□□ -0.26
LINC00839-202ENST00000429940 KCTD9Q7L273 389 aa13.43□□□□□ -0.26
LINC00839-202ENST00000429940 TSNAXQ99598 290 aaKnown RBP13.43□□□□□ -0.26
LINC00839-202ENST00000429940 MBD2Q9UBB5 411 aa13.43□□□□□ -0.26
LINC00839-202ENST00000429940 RAB22AQ9UL26 194 aa13.43□□□□□ -0.26
LINC00839-202ENST00000429940 RAB19A4D1S5 217 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 EEF1E1-BLOC1S5C9J1V9 151 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 PLPP3O14495 311 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 EIF1AYO14602 144 aaKnown RBP13.42□□□□□ -0.26
LINC00839-202ENST00000429940 KCNAB3O43448 404 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 IGHMP01871 453 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 ZNF823P16415 610 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 MPZP25189 248 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 EIF1AXP47813 144 aaKnown RBP13.42□□□□□ -0.26
LINC00839-202ENST00000429940 GABRA4P48169 554 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 ZNF704Q6ZNC4 412 aaPredicted RBP13.42□□□□□ -0.26
LINC00839-202ENST00000429940 DCXRQ7Z4W1 244 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 LINC00346Q8IVM7 164 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 NUDCD2Q8WVJ2 157 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 FOXRED1Q96CU9 486 aaPredicted RBP13.42□□□□□ -0.26
LINC00839-202ENST00000429940 ZNF285Q96NJ3 590 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 SAV1Q9H4B6 383 aaPredicted RBP13.42□□□□□ -0.26
LINC00839-202ENST00000429940 CNTD2Q9H8S5 307 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 LMAN1LQ9HAT1 526 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 RHBDD3Q9Y3P4 386 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 ALPK2Q86TB3 2170 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 TMEM269A0A1B0GVZ9 245 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 TMEM218A2RU14 115 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 A8MVM7 634 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 RAB27BO00194 218 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 GPR31O00270 319 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 P2RY10O00398 339 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 NPIPB7O75200 414 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 IGKV3-11P04433 115 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 AKR1C4P17516 323 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 GABRG2P18507 467 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 CAPZBP47756 277 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 NR0B1P51843 470 aaKnown RBP13.42□□□□□ -0.26
LINC00839-202ENST00000429940 AKR1C2P52895 323 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 MRPS21P82921 87 aaKnown RBP13.42□□□□□ -0.26
LINC00839-202ENST00000429940 AKR1C1Q04828 323 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 LYPD6Q86Y78 171 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 ADAD2Q8NCV1 583 aaKnown RBP13.42□□□□□ -0.26
LINC00839-202ENST00000429940 ZNF721Q8TF20 911 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 FAM46BQ96A09 425 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 OR11A1Q9GZK7 315 aa13.42□□□□□ -0.26
LINC00839-202ENST00000429940 CACNA1IQ9P0X4 2223 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 LOC101059948A0A1B0GTJ6 334 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 PCP4L1A6NKN8 68 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 ALG1L2C9J202 215 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 DDAH2O95865 285 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 ERCC1P07992 297 aaPredicted RBP13.41□□□□□ -0.26
LINC00839-202ENST00000429940 GLULP15104 373 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 HRH1P35367 487 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 PLCXD2Q0VAA5 305 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 TMEM244Q5VVB8 128 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 HLA-DQA1Q5Y7H0 255 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 FAHD2BQ6P2I3 314 aaPredicted RBP13.41□□□□□ -0.26
LINC00839-202ENST00000429940 KDM8Q8N371 416 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 FAHD2AQ96GK7 314 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 ZNF175Q9Y473 711 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 KIF26BQ2KJY2 2108 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 TDRD6O60522 2096 aaKnown RBP13.41□□□□□ -0.26
LINC00839-202ENST00000429940 A0A1W2PQD3 144 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 C5orf51A6NDU8 294 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 ZNF208O43345 1280 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 FADS1O60427 444 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 HLA-DOBP13765 273 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 SLC26A5P58743 744 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 SVBPQ8N300 66 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 PAQR4Q8N4S7 273 aaPredicted RBP13.41□□□□□ -0.26
LINC00839-202ENST00000429940 SLC26A10Q8NG04 563 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 OR5AP2Q8NGF4 316 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 FGGYQ96C11 551 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 NECAB3Q96P71 396 aaPredicted RBP13.41□□□□□ -0.26
LINC00839-202ENST00000429940 LRRC61Q9BV99 259 aa13.41□□□□□ -0.26
LINC00839-202ENST00000429940 C13orf42A0A1B0GVH6 325 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 H7C2Y5 167 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 TSPAN2O60636 221 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 AHSA1O95433 338 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 PGAM2P15259 253 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 PSMB6P28072 239 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 GNALP38405 381 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 OR1D4P47884 311 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 FMODQ06828 376 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 UNC119Q13432 240 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 EBPQ15125 230 aaKnown RBP13.4□□□□□ -0.26
LINC00839-202ENST00000429940 TMEM88Q6PEY1 159 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 ZNF813Q6ZN06 617 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.4□□□□□ -0.26
LINC00839-202ENST00000429940 C9orf40Q8IXQ3 194 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 PUSL1Q8N0Z8 303 aaKnown RBP13.4□□□□□ -0.26
LINC00839-202ENST00000429940 GTPBP8Q8N3Z3 284 aaPredicted RBP13.4□□□□□ -0.26
LINC00839-202ENST00000429940 OR4K17Q8NGC6 315 aa13.4□□□□□ -0.26
LINC00839-202ENST00000429940 ST7LQ8TDW4 575 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms