RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 OR4E1P0C645 316 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 NME1P15531 152 aaKnown RBP7.79□□□□□ -1.16
GABPB1-205ENST00000429662 PTGS2P35354 604 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 EIF1AXP47813 144 aaKnown RBP7.79□□□□□ -1.16
GABPB1-205ENST00000429662 ARRB1P49407 418 aaPredicted RBP7.79□□□□□ -1.16
GABPB1-205ENST00000429662 MAZP56270 477 aaKnown RBP7.79□□□□□ -1.16
GABPB1-205ENST00000429662 SLC26A5P58743 744 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 LCN6P62502 163 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 EBPQ15125 230 aaKnown RBP7.79□□□□□ -1.16
GABPB1-205ENST00000429662 PCK2Q16822 640 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 SMUG1Q53HV7 270 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 ZNF542PQ5EBM4 170 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 FAAP20Q6NZ36 180 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 OGFOD3Q6PK18 319 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 NDUFAF7Q7L592 441 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 GLRX5Q86SX6 157 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 CCDC36Q8IYA8 594 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 SLC38A6Q8IZM9 456 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 STPG2Q8N412 459 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 OR51A4Q8NGJ6 313 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 OR52B4Q8NGK2 314 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 OR5M1Q8NGP8 315 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 OR10AC1Q8NH08 325 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 ST8SIA1Q92185 356 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 WBP1Q96G27 269 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 SLC25A44Q96H78 314 aaPredicted RBP7.79□□□□□ -1.16
GABPB1-205ENST00000429662 ABHD6Q9BV23 337 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 PTDSS2Q9BVG9 487 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 TPSD1Q9BZJ3 242 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 OR8D2Q9GZM6 311 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 SHARPINQ9H0F6 387 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 FXYD6Q9H0Q3 95 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 PCED1AQ9H1Q7 454 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 POFUT1Q9H488 388 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 CDCP1Q9H5V8 836 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 COMMD9Q9P000 198 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 PILRBQ9UKJ0 227 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 DOCK9Q9BZ29 2069 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 LRP4O75096 1905 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 NUP210LQ5VU65 1888 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 ABCA12Q86UK0 2595 aa7.79□□□□□ -1.16
GABPB1-205ENST00000429662 KNTC1P50748 2209 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 TLN1Q9Y490 2541 aaKnown RBP7.78□□□□□ -1.16
GABPB1-205ENST00000429662 TMEM131Q92545 1883 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 A0A1B0GTH9 108 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 A0A1B0GTI1 187 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 KANTRA0A1W2PQU2 76 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 C11orf98E9PRG8 122 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 SRSF10O75494 262 aaKnown RBP7.78□□□□□ -1.16
GABPB1-205ENST00000429662 NUDT14O95848 222 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 ERCC1P07992 297 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-205ENST00000429662 PTHLHP12272 177 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 HSD11B1P28845 292 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 CD34P28906 385 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 MPGP29372 298 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 APOBEC1P41238 236 aaKnown RBP7.78□□□□□ -1.16
GABPB1-205ENST00000429662 ARL4DP49703 201 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 NR0B1P51843 470 aaKnown RBP7.78□□□□□ -1.16
GABPB1-205ENST00000429662 EFNB2P52799 333 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 H2BFSP57053 126 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 PMPCAQ10713 525 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 GLYATL3Q5SZD4 288 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 NHLRC1Q6VVB1 395 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 ZNF627Q7L945 461 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 TMPRSS7Q7RTY8 843 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-205ENST00000429662 MARCH3Q86UD3 253 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 TMEM17Q86X19 198 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 ZNF584Q8IVC4 421 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 SFTPA2Q8IWL1 248 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 BEST3Q8N1M1 668 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 KCNRGQ8N5I3 272 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 BVESQ8NE79 360 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 OR5M8Q8NGP6 311 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 OR1N1Q8NGS0 311 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 OR13C3Q8NGS6 347 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 OR8K3Q8NH51 312 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 MFSD8Q8NHS3 518 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 COQ8AQ8NI60 647 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 GPR119Q8TDV5 335 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 FAM46BQ96A09 425 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 SLC25A36Q96CQ1 311 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 CLIP3Q96DZ5 547 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 GAL3ST4Q96RP7 486 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 LMF1Q96S06 567 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 UQCC2Q9BRT2 126 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 NUDT9Q9BW91 350 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 ULBP3Q9BZM4 244 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 WWTR1Q9GZV5 400 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 MRPL22Q9NWU5 206 aaKnown RBP7.78□□□□□ -1.16
GABPB1-205ENST00000429662 FBLN5Q9UBX5 448 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 OR52A1Q9UKL2 312 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 CYP8B1Q9UNU6 501 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 TMEM184BQ9Y519 407 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-205ENST00000429662 LRP12Q9Y561 859 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 CSMD1Q96PZ7 3565 aa7.78□□□□□ -1.16
GABPB1-205ENST00000429662 CABIN1Q9Y6J0 2220 aa7.77□□□□□ -1.16
GABPB1-205ENST00000429662 ANKUB1A6NFN9 424 aa7.77□□□□□ -1.17
GABPB1-205ENST00000429662 H0YC42 278 aa7.77□□□□□ -1.17
GABPB1-205ENST00000429662 ZNF208O43345 1280 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms