RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 KMT2EQ8IZD2 1858 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 OPN1LWP04000 364 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 CD63P08962 238 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 ZNF20P17024 532 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 RAB3AP20336 220 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 SELENOPP49908 381 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 DSCR4P56555 118 aaPredicted RBP12.16□□□□□ -0.46
THBS3-202ENST00000428962 PER3P56645 1201 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 GABREP78334 506 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 PMPCAQ10713 525 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 HIST3H3Q16695 136 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 CARD17Q5XLA6 110 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 GABRG1Q8N1C3 465 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 OR1M1Q8NGA1 313 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 OR11H4Q8NGC9 324 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 OR10S1Q8NGN2 331 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 FGGYQ96C11 551 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 CLEC4MQ9H2X3 399 aaPredicted RBP12.16□□□□□ -0.46
THBS3-202ENST00000428962 DKKL1Q9UK85 242 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 HS3ST3B1Q9Y662 390 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 ALPK2Q86TB3 2170 aa12.16□□□□□ -0.46
THBS3-202ENST00000428962 CACNA1CQ13936 2221 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 NSG1A0A0A6YYJ2 146 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 PATE3B3GLJ2 98 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 DOK2O60496 412 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 EIF1BO60739 113 aaKnown RBP12.15□□□□□ -0.46
THBS3-202ENST00000428962 KLF7O75840 302 aaPredicted RBP12.15□□□□□ -0.46
THBS3-202ENST00000428962 BPNT1O95861 308 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 RLN1P04808 185 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 CCL4P13236 92 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 LIFP15018 202 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 ZNF17P17021 662 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 CLDN6P56747 220 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 GRB2P62993 217 aaKnown RBP12.15□□□□□ -0.46
THBS3-202ENST00000428962 ZBTB37Q5TC79 503 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 SLC23A3Q6PIS1 610 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 ZNF813Q6ZN06 617 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 LYPD6Q86Y78 171 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 PAQR8Q8TEZ7 354 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 CCDC107Q8WV48 283 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 FAM46BQ96A09 425 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 SEH1LQ96EE3 360 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 NAA11Q9BSU3 229 aaPredicted RBP12.15□□□□□ -0.46
THBS3-202ENST00000428962 SLC39A1Q9NY26 324 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 EIF3KQ9UBQ5 218 aaKnown RBP12.15□□□□□ -0.46
THBS3-202ENST00000428962 KIF26BQ2KJY2 2108 aa12.15□□□□□ -0.46
THBS3-202ENST00000428962 LOC101059948A0A1B0GTJ6 334 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 MEIS3P1A6NDR6 274 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 GDF9O60383 454 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 LMX1BO60663 402 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 VAMP5O95183 116 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 CYB5AP00167 134 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 CD3DP04234 171 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 GP1BAP07359 652 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 CELA2AP08217 269 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 MELTFP08582 738 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 QDPRP09417 244 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 GUCA1AP43080 201 aaPredicted RBP12.14□□□□□ -0.47
THBS3-202ENST00000428962 ZNF81P51508 661 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 RAET1LQ5VY80 246 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 TMEM156Q8N614 296 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 OR4D6Q8NGJ1 314 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 OR51S1Q8NGJ8 323 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 OR1J2Q8NGS2 313 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 EXO5Q9H790 373 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 HPF1Q9NWY4 346 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 ELF5Q9UKW6 265 aaPredicted RBP12.14□□□□□ -0.47
THBS3-202ENST00000428962 GJE1A6NN92 205 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 B4E171 279 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 ZNF814B7Z6K7 855 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 RAB3DO95716 219 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 CCL3P10147 92 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
THBS3-202ENST00000428962 TSPAN7P41732 249 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 CLDN17P56750 224 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 TSPAN5P62079 268 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 CSNK2A1P68400 391 aaPredicted RBP12.14□□□□□ -0.47
THBS3-202ENST00000428962 FOXK1P85037 733 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 TEX261Q6UWH6 196 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 PGAP1Q75T13 922 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 SLC36A1Q7Z2H8 476 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 RPS19BP1Q86WX3 136 aaKnown RBP12.14□□□□□ -0.47
THBS3-202ENST00000428962 COMMD2Q86X83 199 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 C1orf210Q8IVY1 113 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 OR8S1Q8NH09 359 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 ASB13Q8WXK3 278 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 NKX3-1Q99801 234 aaPredicted RBP12.14□□□□□ -0.47
THBS3-202ENST00000428962 SLC25A21Q9BQT8 299 aaPredicted RBP12.14□□□□□ -0.47
THBS3-202ENST00000428962 NUDT16L1Q9BRJ7 211 aaKnown RBP12.14□□□□□ -0.47
THBS3-202ENST00000428962 CHIAQ9BZP6 476 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 CDCP1Q9H5V8 836 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 CNTD2Q9H8S5 307 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 FAM86C1Q9NVL1 165 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 B3GNT2Q9NY97 397 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 ASH2LQ9UBL3 628 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 SLC5A6Q9Y289 635 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 RHBDD3Q9Y3P4 386 aa12.14□□□□□ -0.47
THBS3-202ENST00000428962 U3KQ87 197 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms