RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SNRPGP62308 76 aaKnown RBP12.52□□□□□ -0.41
SGCE-204ENST00000428696 PCK2Q16822 640 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 RSPO1Q2MKA7 263 aaPredicted RBP12.52□□□□□ -0.41
SGCE-204ENST00000428696 MST1LQ2TV78 715 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 MEDAGQ5VYS4 303 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 LRRN1Q6UXK5 716 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 ENTHD1Q8IYW4 607 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 ZCCHC24Q8N2G6 241 aaKnown RBP12.52□□□□□ -0.41
SGCE-204ENST00000428696 ST7LQ8TDW4 575 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 ZNF799Q96GE5 643 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 VCX3BQ9H321 246 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 TBCCD1Q9NVR7 557 aa12.52□□□□□ -0.41
SGCE-204ENST00000428696 BEX4Q9NWD9 120 aaPredicted RBP12.52□□□□□ -0.41
SGCE-204ENST00000428696 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.52□□□□□ -0.41
SGCE-204ENST00000428696 RTTNQ86VV8 2226 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 TBX1O43435 398 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 MPV17P39210 176 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 CAPGP40121 348 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 MTNR1AP48039 350 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 CX3CR1P49238 355 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 RGS6P49758 472 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 GRB2P62993 217 aaKnown RBP12.51□□□□□ -0.41
SGCE-204ENST00000428696 MALLQ13021 153 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 HLXQ14774 488 aaPredicted RBP12.51□□□□□ -0.41
SGCE-204ENST00000428696 C6orf52Q5T4I8 152 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 KCTD18Q6PI47 426 aaPredicted RBP12.51□□□□□ -0.41
SGCE-204ENST00000428696 DTX2Q86UW9 622 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 RHOXF1Q8NHV9 184 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 KLF14Q8TD94 323 aaPredicted RBP12.51□□□□□ -0.41
SGCE-204ENST00000428696 APOBEC3DQ96AK3 386 aaPredicted RBP12.51□□□□□ -0.41
SGCE-204ENST00000428696 CMBLQ96DG6 245 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 DCLRE1CQ96SD1 692 aaKnown RBP12.51□□□□□ -0.41
SGCE-204ENST00000428696 KCNJ15Q99712 375 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 ADI1Q9BV57 179 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 TPK1Q9H3S4 243 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 POFUT1Q9H488 388 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 SLCO1C1Q9NYB5 712 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 MYEF2Q9P2K5 600 aaKnown RBP12.51□□□□□ -0.41
SGCE-204ENST00000428696 ATPIF1Q9UII2 106 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 GPR160Q9UJ42 338 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 GTF2A1LQ9UNN4 478 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 TMEM14AQ9Y6G1 99 aa12.51□□□□□ -0.41
SGCE-204ENST00000428696 TEX15Q9BXT5 2789 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 DSCAMO60469 2012 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 TMEM129A0AVI4 362 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 MAGEB4O15481 346 aaPredicted RBP12.5□□□□□ -0.41
SGCE-204ENST00000428696 TIMM8AO60220 97 aaPredicted RBP12.5□□□□□ -0.41
SGCE-204ENST00000428696 NDUFS7O75251 213 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 SBK2P0C263 348 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 NAT2P11245 290 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 ALOX5APP20292 161 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 PTH2RP49190 550 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 PRSS12P56730 875 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 CXCR4P61073 352 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 OCLNQ16625 522 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 SWI5Q1ZZU3 235 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 GFOD2Q3B7J2 385 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 SETD9Q8NE22 299 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 MARS2Q96GW9 593 aaKnown RBP12.5□□□□□ -0.41
SGCE-204ENST00000428696 COG8Q96MW5 612 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 DOK1Q99704 481 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 MROQ9BYG7 248 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 DDX28Q9NUL7 540 aaKnown RBP12.5□□□□□ -0.41
SGCE-204ENST00000428696 COPS3Q9UNS2 423 aa12.5□□□□□ -0.41
SGCE-204ENST00000428696 PDZD2O15018 2839 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 PLSCR5A0PG75 271 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 M0R233 179 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 TPD52L2O43399 206 aaKnown RBP12.49□□□□□ -0.41
SGCE-204ENST00000428696 MT-ND5P03915 603 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 ERCC1P07992 297 aaPredicted RBP12.49□□□□□ -0.41
SGCE-204ENST00000428696 ZNF250P15622 560 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 AQP4P55087 323 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 ADARB1P78563 741 aaKnown RBP12.49□□□□□ -0.41
SGCE-204ENST00000428696 POU4F2Q12837 409 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 RIPK1Q13546 671 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 GGTLC2Q14390 218 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 EFNB3Q15768 340 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 CARTPTQ16568 116 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 MOGQ16653 247 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 ZNF691Q5VV52 312 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 C11orf71Q6IPW1 123 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 ZNF322Q6U7Q0 402 aaPredicted RBP12.49□□□□□ -0.41
SGCE-204ENST00000428696 DRAM2Q6UX65 266 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 FAM57BQ71RH2 274 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 C8orf59Q8N0T1 100 aaPredicted RBP12.49□□□□□ -0.41
SGCE-204ENST00000428696 OR5AS1Q8N127 324 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 CNIH3Q8TBE1 160 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 SNX33Q8WV41 574 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 IPCEF1Q8WWN9 437 aaPredicted RBP12.49□□□□□ -0.41
SGCE-204ENST00000428696 ASB17Q8WXJ9 295 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 MBD6Q96DN6 1003 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 PGAM5Q96HS1 289 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 HAO2Q9NYQ3 351 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 CSMD1Q96PZ7 3565 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 PLCE1Q9P212 2302 aa12.49□□□□□ -0.41
SGCE-204ENST00000428696 CCDC168Q8NDH2 2452 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms