RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 ZNF679Q8IYX0 411 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 GALNT16Q8N428 558 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 PAQR8Q8TEZ7 354 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 RAB40AQ8WXH6 277 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 MIB2Q96AX9 1013 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 MBD2Q9UBB5 411 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 UPB1Q9UBR1 384 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 NXPH3O95157 252 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 POLR2HP52434 150 aaKnown RBP13.52□□□□□ -0.25
SCAP-206ENST00000428413 FGL1Q08830 312 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 FZD5Q13467 585 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 CCINQ13939 588 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 C20orf196Q8IYI0 205 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 OR51T1Q8NGJ9 327 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 OTOSQ8NHW6 89 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 CCDC107Q8WV48 283 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 CTHRC1Q96CG8 243 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 HAVCR1Q96D42 359 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 SOX7Q9BT81 388 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 B3GALT1Q9Y5Z6 326 aa13.52□□□□□ -0.25
SCAP-206ENST00000428413 ZFHX2Q9C0A1 2572 aaPredicted RBP13.51□□□□□ -0.25
SCAP-206ENST00000428413 TRBV23-1A0A0A0MS06 115 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 MEX3AA1L020 520 aaKnown RBP13.51□□□□□ -0.25
SCAP-206ENST00000428413 CBR1P16152 277 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 LTBRP36941 435 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 EBPQ15125 230 aaKnown RBP13.51□□□□□ -0.25
SCAP-206ENST00000428413 ZFP82Q8N141 532 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 OR52N4Q8NGI2 321 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 JAM3Q9BX67 310 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 SPTBN1Q01082 2364 aaKnown RBP13.51□□□□□ -0.25
SCAP-206ENST00000428413 AKAP6Q13023 2319 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 OR4C45A6NMZ5 311 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 OGG1O15527 345 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 OR2T1O43869 369 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 CSTBP04080 98 aaKnown RBP13.51□□□□□ -0.25
SCAP-206ENST00000428413 CRABP1P29762 137 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 RPS11P62280 158 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCAP-206ENST00000428413 PLXDC2Q6UX71 529 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 GABRG1Q8N1C3 465 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 SLC26A10Q8NG04 563 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 DCUN1D4Q92564 292 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 C4orf45Q96LM5 186 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 PRRG4Q9BZD6 226 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 PCOLCE2Q9UKZ9 415 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 H3BMH7 237 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 DLSTP36957 453 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 CSNK2A1P68400 391 aaPredicted RBP13.51□□□□□ -0.25
SCAP-206ENST00000428413 RNF4P78317 190 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 SKP2Q13309 424 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 EXOSC6Q5RKV6 272 aaKnown RBP13.51□□□□□ -0.25
SCAP-206ENST00000428413 SEZ6L2Q6UXD5 910 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 PRSS35Q8N3Z0 413 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 CSNK2A3Q8NEV1 391 aa13.51□□□□□ -0.25
SCAP-206ENST00000428413 LIN37Q96GY3 246 aaPredicted RBP13.51□□□□□ -0.25
SCAP-206ENST00000428413 ACACAQ13085 2346 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 TRAV1-2A0A0B4J238 106 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 NPIPA2E9PIF3 369 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 NPIPA3F8WFD2 350 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 IL33O95760 270 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 RLN2P04090 185 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 KLK3P07288 261 aaPredicted RBP13.5□□□□□ -0.25
SCAP-206ENST00000428413 HSF1Q00613 529 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 INSM1Q01101 510 aaPredicted RBP13.5□□□□□ -0.25
SCAP-206ENST00000428413 TMEM88Q6PEY1 159 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 GSG1LQ6UXU4 331 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 LRRTM1Q86UE6 522 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 LRRC46Q96FV0 321 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 ZNF764Q96H86 408 aaPredicted RBP13.5□□□□□ -0.25
SCAP-206ENST00000428413 GPR137Q96N19 417 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 SLC22A11Q9NSA0 550 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 MOKQ9UQ07 419 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 COL6A3P12111 3177 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 MED13LQ71F56 2210 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 A0A1B0GX78 115 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 SLC22A23A1A5C7 686 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 OR14I1A6ND48 311 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 DISC1C4P0D8 188 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 ARPC3O15145 178 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 ZNF208O43345 1280 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 ANGPTL7O43827 346 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 FADS1O60427 444 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 CTAG2O75638 210 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 MPC2O95563 127 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 GUSBP08236 651 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 HRH1P35367 487 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 ZNF141Q15928 474 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 LINC01590Q5TEZ4 76 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 RNLSQ5VYX0 342 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 GLIPR1L1Q6UWM5 242 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 PDZD9Q8IXQ8 264 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 SCMH1Q96GD3 660 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 SLC19A3Q9BZV2 496 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 ZNF160Q9HCG1 818 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 PCDH15Q96QU1 1955 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 IGHV1OR21-1A0A087WYE8 117 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 A0A0A6YYH2 397 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 LOC100289279A0A1B0GTE1 492 aa13.5□□□□□ -0.25
SCAP-206ENST00000428413 A6NJ64 397 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms