RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 NIT2Q9NQR4 276 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 NUP210Q8TEM1 1887 aaPredicted RBP9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 OR2W5A6NFC9 320 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 RNASEK-C17orf49H0YIS7 233 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 TAAR5O14804 337 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 HOXC4P09017 264 aaPredicted RBP9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 ABOP16442 354 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 ZNF542PQ5EBM4 170 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 Q6ZSR6 202 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 SLC37A2Q8TED4 501 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 RAB3CQ96E17 227 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 NMES1Q9C002 83 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 TAF9BQ9HBM6 251 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 KPTNQ9Y664 436 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 ZNF878C9JN71 531 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 IL33O95760 270 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 HOXB5P09067 269 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 HLA-GP17693 338 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 FSTP19883 344 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 NPY4RP50391 375 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 YPEL5P62699 121 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 EBPQ15125 230 aaKnown RBP9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 ANGPTL5Q86XS5 388 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 SCARF2Q96GP6 870 aaPredicted RBP9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 SPOCK3Q9BQ16 436 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 SLC2A8Q9NY64 477 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 LPAR3Q9UBY5 353 aa9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 CARHSP1Q9Y2V2 147 aaKnown RBP9.67□□□□□ -0.86
ATP2C1-204ENST00000428331 PNPP00491 289 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 GPR3P46089 330 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 PPT1P50897 306 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 ZP2Q05996 745 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 C21orf62-AS1Q17RA5 79 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 ZNF813Q6ZN06 617 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 CATSPERDQ86XM0 798 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 LINC00346Q8IVM7 164 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 SLC30A7Q8NEW0 376 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 OIT3Q8WWZ8 545 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 CMBLQ96DG6 245 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 NXF5Q9H1B4 397 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 FAM96BQ9Y3D0 163 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 TMED7-TICAM2A0A0A6YYA0 188 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 BORCS7-ASMTA0A0B4J1R7 106 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 BPNT1O95861 308 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 GNB3P16520 340 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 BLKP51451 505 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 CSNK2A1P68400 391 aaPredicted RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 C1orf61Q13536 156 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 CSNK2A3Q8NEV1 391 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 EDEM2Q9BV94 578 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 EIF5A2Q9GZV4 153 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 SEC61A2Q9H9S3 476 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 LRRK1Q38SD2 2015 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 A8MVM7 634 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 F12P00748 615 aaPredicted RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 SNRNP70P08621 437 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 CPT2P23786 658 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 ZNF93P35789 620 aaPredicted RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 NPBWR1P48145 328 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 POLR2HP52434 150 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 ROM1Q03395 351 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 SKP2Q13309 424 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 EIF2S3LQ2VIR3 472 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 GFOD2Q3B7J2 385 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 CHRFAM7AQ494W8 412 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 ARRDC1Q8N5I2 433 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 LRRC75AQ8NAA5 344 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 KCNG3Q8TAE7 436 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 RXFP4Q8TDU9 374 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 WNT2BQ93097 391 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 KIAA0100Q14667 2235 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 NSA2O95478 260 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 CTLA4P16410 223 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 PTAFRP25105 342 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 TNFRSF4P43489 277 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 DAP3P51398 398 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 MFGE8Q08431 387 aaPredicted RBP9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 ZNF616Q08AN1 781 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 C1orf140Q5VVS0 124 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 PRSS54Q6PEW0 395 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 ZNF561Q8N587 486 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 ARL5BQ96KC2 179 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 FAM117AQ9C073 453 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 RAB18Q9NP72 206 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 SLC5A6Q9Y289 635 aa9.66□□□□□ -0.86
ATP2C1-204ENST00000428331 CENPFP49454 3210 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 K7EPK0 472 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 EFSO43281 561 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 OIP5O43482 229 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 HTR3BO95264 441 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 CTAG1AP78358 180 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 FUT7Q11130 342 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 MOGAT2Q3SYC2 334 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 DRAM2Q6UX65 266 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 FAM71E2Q8N5Q1 922 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 C2orf50Q96LR7 162 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 ZNF285Q96NJ3 590 aa9.65□□□□□ -0.86
ATP2C1-204ENST00000428331 NRIP2Q9BQI9 281 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms