RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 RAB39BQ96DA2 213 aa17.56■□□□□ 0.4
HSPG2-205ENST00000427897 ATF6BQ99941 703 aa17.56■□□□□ 0.4
HSPG2-205ENST00000427897 DGCR6LQ9BY27 220 aa17.56■□□□□ 0.4
HSPG2-205ENST00000427897 PLA2G12AQ9BZM1 189 aa17.56■□□□□ 0.4
HSPG2-205ENST00000427897 ARMC1Q9NVT9 282 aa17.56■□□□□ 0.4
HSPG2-205ENST00000427897 VNN3Q9NY84 501 aa17.56■□□□□ 0.4
HSPG2-205ENST00000427897 RIIAD1A6NNX1 92 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 KITLGP21583 273 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 FMO3P31513 532 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 DVL1P1P54792 670 aaPredicted RBP17.55■□□□□ 0.4
HSPG2-205ENST00000427897 TPTEP56180 551 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 CDK5R2Q13319 367 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 TAF13Q15543 124 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 TMEM255AQ5JRV8 349 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 CFAP77Q6ZQR2 320 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 C10orf67Q8IYJ2 551 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 LNX2Q8N448 690 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 OR51L1Q8NGJ5 315 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 OR8D4Q8NGM9 314 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 OR9Q1Q8NGQ5 310 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 SPTSSAQ969W0 71 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 ZNF582Q96NG8 517 aaPredicted RBP17.55■□□□□ 0.4
HSPG2-205ENST00000427897 CYB5R1Q9UHQ9 305 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 CACNG2Q9Y698 323 aa17.55■□□□□ 0.4
HSPG2-205ENST00000427897 TVP23AA6NH52 213 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 WNT9BO14905 357 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 LCATP04180 440 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 ADH4P08319 380 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 ZNF3P17036 446 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 POU1F1P28069 291 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 HLXQ14774 488 aaPredicted RBP17.54■□□□□ 0.4
HSPG2-205ENST00000427897 ACSM5Q6NUN0 579 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 SLC27A4Q6P1M0 643 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 OR51F2Q8NH61 342 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 FEVQ99581 238 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 GAL3ST1Q99999 423 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 ZNF665Q9H7R5 613 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 PDP1Q9P0J1 537 aaPredicted RBP17.54■□□□□ 0.4
HSPG2-205ENST00000427897 WIPI2Q9Y4P8 454 aa17.54■□□□□ 0.4
HSPG2-205ENST00000427897 RTTNQ86VV8 2226 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 MSMBP08118 114 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 CD55P08174 381 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 SPARCP09486 303 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 SELEP16581 610 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 SLC6A9P48067 706 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 CRMP1Q14194 572 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 OR2T2Q6IF00 324 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 OR6K6Q8NGW6 343 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 OR13G1Q8NGZ3 307 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 OR4Q3Q8NH05 313 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 C1orf159Q96HA4 380 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 NIPSNAP1Q9BPW8 284 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 WDR76Q9H967 626 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 MRPL22Q9NWU5 206 aaKnown RBP17.53■□□□□ 0.4
HSPG2-205ENST00000427897 IL19Q9UHD0 177 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 PCDHB10Q9UN67 800 aa17.53■□□□□ 0.4
HSPG2-205ENST00000427897 GYPBP06028 91 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 PAICSP22234 425 aaKnown RBP17.52■□□□□ 0.4
HSPG2-205ENST00000427897 GGT2P36268 569 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 BLVRAP53004 296 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 ACTR3P61158 418 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 FBXW12Q6X9E4 464 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 ZNF771Q7L3S4 317 aaPredicted RBP17.52■□□□□ 0.4
HSPG2-205ENST00000427897 PAPD5Q8NDF8 572 aaKnown RBP17.52■□□□□ 0.4
HSPG2-205ENST00000427897 BHLHE23Q8NDY6 225 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 OR8G5Q8NG78 346 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 TMEM186Q96B77 213 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 CENPMQ9NSP4 180 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 HIF1ANQ9NWT6 349 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 UBAP1Q9NZ09 502 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 PPP1R3CQ9UQK1 317 aa17.52■□□□□ 0.4
HSPG2-205ENST00000427897 FAM157AC9JC47 383 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 FKBP6O75344 327 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 SBK2P0C263 348 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 ACSM4P0C7M7 580 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 RPS27P42677 84 aaKnown RBP17.51■□□□□ 0.39
HSPG2-205ENST00000427897 ENTPD1P49961 510 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 ERFP50548 548 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 LMO4P61968 165 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 SHQ1Q6PI26 577 aaKnown RBP17.51■□□□□ 0.39
HSPG2-205ENST00000427897 CD300LDQ6UXZ3 194 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 MRPL21Q7Z2W9 205 aaKnown RBP17.51■□□□□ 0.39
HSPG2-205ENST00000427897 ST7LQ8TDW4 575 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 ITLN1Q8WWA0 313 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 DUS3LQ96G46 650 aaKnown RBP17.51■□□□□ 0.39
HSPG2-205ENST00000427897 MDFIQ99750 246 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 C1QTNF5Q9BXJ0 243 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 TEX12Q9BXU0 123 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 TMEM100Q9NV29 134 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 N6AMT1Q9Y5N5 214 aa17.51■□□□□ 0.39
HSPG2-205ENST00000427897 TRAV20A0A0B4J274 112 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 ARRDC5A6NEK1 342 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 RNF212BA8MTL3 300 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 M0R135 149 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 ZNF593O00488 134 aaPredicted RBP17.5■□□□□ 0.39
HSPG2-205ENST00000427897 SPI1P17947 270 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 GRK5P34947 590 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 SLC25A1P53007 311 aa17.5■□□□□ 0.39
HSPG2-205ENST00000427897 KPNB1Q14974 876 aaKnown RBP17.5■□□□□ 0.39
HSPG2-205ENST00000427897 ZNF362Q5T0B9 420 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms