RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SARGQ9BW04 601 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 HINT2Q9BX68 163 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 ELOVL3Q9HB03 270 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 SCPEP1Q9HB40 452 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 SLC22A11Q9NSA0 550 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 KCNIP1Q9NZI2 227 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 KCNS2Q9ULS6 477 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 HS3ST3B1Q9Y662 390 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 MPDZO75970 2070 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 CDH23Q9H251 3354 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 PRH1P02810 166 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 QDPRP09417 244 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 RD3LP0DJH9 198 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 SLC2A1P11166 492 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 SRP14P37108 136 aaKnown RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 GDNFP39905 211 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 EBPQ15125 230 aaKnown RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 GTPBP8Q8N3Z3 284 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF565Q8N9K5 539 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 RELL2Q8NC24 303 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 TEAD3Q99594 435 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 DNTTIP1Q9H147 329 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 CHST11Q9NPF2 352 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 GPR55Q9Y2T6 319 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-204ENST00000427724 V9GYH0 126 aa9.59□□□□□ -0.87
TCOF1-204ENST00000427724 UNC80Q8N2C7 3258 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 A0A087WZY1 265 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 TRAV20A0A0B4J274 112 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 LRRC30A6NM36 301 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 ABCA1O95477 2261 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 LIMS3P0CW19 117 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 LIMS4P0CW20 117 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 PSMB1P20618 241 aaKnown RBP9.58□□□□□ -0.88
TCOF1-204ENST00000427724 S100A11P31949 105 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 RAP2BP61225 183 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 PCGF3Q3KNV8 242 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 ALKBH6Q3KRA9 238 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 ABCA11PQ4W5N1 156 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 Q5BKY6 102 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 BAIAP2L2Q6UXY1 529 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 PGAP1Q75T13 922 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 TPRA1Q86W33 373 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 OR10D3Q8NH80 312 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 SYNPRQ8TBG9 265 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
TCOF1-204ENST00000427724 SLC38A1Q9H2H9 487 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 C1orf198Q9H425 327 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 BCL2L10Q9HD36 194 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 ZMAT5Q9UDW3 170 aaKnown RBP9.58□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF462Q96JM2 2506 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 CBX7O95931 251 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 FRKP42685 505 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-204ENST00000427724 MVDP53602 400 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 DLX5P56178 289 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 HSF1Q00613 529 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 ARHGAP11BQ3KRB8 267 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 CLLU1Q5K131 121 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 MAFIPQ8WZ33 124 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 MIB2Q96AX9 1013 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 C10orf90Q96M02 699 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 FLVCR2Q9UPI3 526 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 NEUROG3Q9Y4Z2 214 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 NPIPB8E9PQR5 432 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 PLA2G10O15496 165 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 PRICKLE3O43900 615 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-204ENST00000427724 PRAF2O60831 178 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 B4GALT1P15291 398 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 NAGAP17050 411 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 HOXB9P17482 250 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-204ENST00000427724 CD79BP40259 229 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 GLP1RP43220 463 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 C21orf58P58505 322 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 FLI1Q01543 452 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-204ENST00000427724 CEACAM16Q2WEN9 425 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 OR4Q3Q8NH05 313 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 ZBTB8AQ96BR9 441 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 LINC00052Q96N35 136 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 FGF20Q9NP95 211 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-204ENST00000427724 THSD7BQ9C0I4 1608 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 DOCK7Q96N67 2140 aa9.58□□□□□ -0.88
TCOF1-204ENST00000427724 GREB1Q4ZG55 1949 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 LINC01387J3KSC0 135 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 CHP2O43745 196 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 TGM6O95932 706 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 CD14P08571 375 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 SBK2P0C263 348 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 IRF3Q14653 427 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 DPY19L4Q7Z388 723 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 RNF113BQ8IZP6 322 aaKnown RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 LHFPL5Q8TAF8 219 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ST7LQ8TDW4 575 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 PFDN5Q99471 154 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 A0A1W2PS29 197 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 BTBD17A6NE02 478 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 MPPED1O15442 326 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 EIF4EP06730 217 aaKnown RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 CT62P0C5K7 136 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 CTRB1P17538 263 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 SRD5A2P31213 254 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 OPRM1P35372 400 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms