RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 IQCF6A8MYZ5 107 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 XKRYO14609 159 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 IFNA8P32881 189 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 RPL4P36578 427 aaKnown RBP12.13□□□□□ -0.47
PDAP1-202ENST00000426447 OR1E2P47887 323 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 SLC18A1P54219 525 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 EGR3Q06889 387 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 NFYCQ13952 458 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 VMACQ2NL98 169 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 OTPQ5XKR4 325 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 SFRP4Q6FHJ7 346 aaPredicted RBP12.13□□□□□ -0.47
PDAP1-202ENST00000426447 Q6ZTK2 550 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 OAFQ86UD1 273 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 LDLRAD3Q86YD5 345 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 LRRC75AQ8NAA5 344 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 MRAPQ8TCY5 172 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 WDR76Q9H967 626 aa12.13□□□□□ -0.47
PDAP1-202ENST00000426447 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDAP1-202ENST00000426447 V9GYY5 206 aaPredicted RBP12.13□□□□□ -0.47
PDAP1-202ENST00000426447 OR6C6A6NF89 314 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 ADAM20O43506 726 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 FAM20BO75063 409 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 GATA4P43694 442 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 ST3GAL3Q11203 375 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 MAB21L1Q13394 359 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 OR8B8Q15620 311 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 CCDC92Q53HC0 331 aaPredicted RBP12.12□□□□□ -0.47
PDAP1-202ENST00000426447 CCDC80Q76M96 950 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 Q8TCH9 128 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 RASSF4Q9H2L5 321 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDAP1-202ENST00000426447 RNF7Q9UBF6 113 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 POLR1DQ9Y2S0 133 aa12.12□□□□□ -0.47
PDAP1-202ENST00000426447 CAB39Q9Y376 341 aaPredicted RBP12.12□□□□□ -0.47
PDAP1-202ENST00000426447 ANKRD61A6NGH8 418 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 EFCAB9A8MZ26 197 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 RER1O15258 196 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 SLC16A7O60669 478 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 IFNA14P01570 189 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 OPN1MWP04001 364 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 OPN1MW2P0DN77 364 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 OPN1MW3P0DN78 364 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 TGFBR2P37173 567 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 CRYBA2P53672 197 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 MAGOHP61326 146 aaKnown RBP12.11□□□□□ -0.47
PDAP1-202ENST00000426447 LSM6P62312 80 aaKnown RBP12.11□□□□□ -0.47
PDAP1-202ENST00000426447 ANKDD1AQ495B1 522 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 KPRPQ5T749 579 aaPredicted RBP12.11□□□□□ -0.47
PDAP1-202ENST00000426447 SAMD5Q5TGI4 173 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 PRAMEF6Q5VXH4 476 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 DPP10Q8N608 796 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 CELF2-AS1Q8N7Q2 184 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 C7orf26Q96N11 449 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 ZNF583Q96ND8 569 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 ECSITQ9BQ95 431 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 PARD6BQ9BYG5 372 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 CTSZQ9UBR2 303 aa12.11□□□□□ -0.47
PDAP1-202ENST00000426447 COA3Q9Y2R0 106 aaPredicted RBP12.11□□□□□ -0.47
PDAP1-202ENST00000426447 TEX13CA0A0J9YWL9 993 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 PRSS37A4D1T9 235 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 LGALS8O00214 317 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 NDUFA2O43678 99 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 AHCYL1O43865 530 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 KHDRBS3O75525 346 aaKnown RBP12.1□□□□□ -0.47
PDAP1-202ENST00000426447 TSPAN9O75954 239 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 FBP1P09467 338 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 CTLA4P16410 223 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 FUT4P22083 530 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 CENPAP49450 140 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 RAD23AP54725 363 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 PRSS12P56730 875 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 LOXL3P58215 753 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 HOXA4Q00056 320 aaPredicted RBP12.1□□□□□ -0.47
PDAP1-202ENST00000426447 COX10Q12887 443 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 MPPED2Q15777 294 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 CLEC12AQ5QGZ9 265 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 BEND6Q5SZJ8 279 aaPredicted RBP12.1□□□□□ -0.47
PDAP1-202ENST00000426447 BTN2A1Q7KYR7 527 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.1□□□□□ -0.47
PDAP1-202ENST00000426447 GLB1L2Q8IW92 636 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 NRMQ8IXM6 262 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 GALNT4Q8N4A0 578 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 PIP4P2Q8N4L2 257 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 SPRYD4Q8WW59 207 aaPredicted RBP12.1□□□□□ -0.47
PDAP1-202ENST00000426447 PPP1R14AQ96A00 147 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 Q96M85 177 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 CNTD2Q9H8S5 307 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 TRIM36Q9NQ86 728 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 ATPIF1Q9UII2 106 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 VPREB3Q9UKI3 123 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 ADAM18Q9Y3Q7 739 aa12.1□□□□□ -0.47
PDAP1-202ENST00000426447 TRAV38-1A0A0B4J264 116 aa12.09□□□□□ -0.47
PDAP1-202ENST00000426447 ECDO95905 644 aaPredicted RBP12.09□□□□□ -0.47
PDAP1-202ENST00000426447 CD200P41217 278 aa12.09□□□□□ -0.47
PDAP1-202ENST00000426447 SLC9A3P48764 834 aa12.09□□□□□ -0.47
PDAP1-202ENST00000426447 MALLQ13021 153 aa12.09□□□□□ -0.47
PDAP1-202ENST00000426447 HERPUD1Q15011 391 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms