RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, human

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL12A1-205	ENST00000425443	MICU1	Q9BPX6	476 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	FARSA	Q9Y285	508 aa	Known RBP	11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	MUC3A	Q02505	3323 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	SDK2	Q58EX2	2172 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	GGT3P	A6NGU5	568 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443		A8MVM7	634 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	SNRPGP15	A8MWD9	76 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF432	O94892	652 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	PNP	P00491	289 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	MT-ATP6	P00846	226 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	S100A11	P31949	105 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	EFNA3	P52797	238 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	DEFA5	Q01523	94 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	EGR3	Q06889	387 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	RASGEF1B	Q0VAM2	473 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	GFOD2	Q3B7J2	385 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	LINC00346	Q8IVM7	164 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF417	Q8TAU3	575 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	ARL6	Q9H0F7	186 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	PCED1A	Q9H1Q7	454 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	STEAP1	Q9UHE8	339 aa		11.64	□□□□□ -0.55
COL12A1-205	ENST00000425443	PRSS37	A4D1T9	235 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443		M0QYG6	137 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	SIGLEC6	O43699	453 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	MED6	O75586	246 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	EIF2S3	P41091	472 aa	Known RBP	11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	SPOCK1	Q08629	439 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	SGCB	Q16585	318 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	LRRC37A5P	Q49AS3	106 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	DMRTC1	Q5HYR2	192 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	SLC18B1	Q6NT16	456 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	NDUFAF7	Q7L592	441 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	SLC25A45	Q8N413	288 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	JAGN1	Q8N5M9	183 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	RELL2	Q8NC24	303 aa	Predicted RBP	11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	STT3B	Q8TCJ2	826 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	SHD	Q96IW2	340 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZC3H10	Q96K80	434 aa	Known RBP	11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	MRI1	Q9BV20	369 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	TMPRSS13	Q9BYE2	586 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	GPR160	Q9UJ42	338 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	FBXL2	Q9UKC9	423 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	B9D1	Q9UPM9	204 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443		A0A1W2PQD3	144 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	GP1BA	P07359	652 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	GABRA1	P14867	456 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	LAP3	P28838	519 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	MNDA	P41218	407 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	ARRB1	P49407	418 aa	Predicted RBP	11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	GRINA	Q7Z429	371 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	PRR18	Q8N4B5	295 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR2AK2	Q8NG84	335 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR1S1	Q8NH92	325 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	OTOS	Q8NHW6	89 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	EXO5	Q9H790	373 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	SH3BGRL2	Q9UJC5	107 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	VDAC3	Q9Y277	283 aa		11.63	□□□□□ -0.55
COL12A1-205	ENST00000425443	TRIOBP	Q9H2D6	2365 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443		H3BMH7	237 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	DNASE2	O00115	360 aa	Predicted RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	BPNT1	O95861	308 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	HLA-DOB	P13765	273 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	IL11	P20809	199 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	TAS2R60	P59551	318 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	SCGB2B2	Q4G0G5	96 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	ACER2	Q5QJU3	275 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	ANKRD16	Q6P6B7	361 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	KCTD18	Q6PI47	426 aa	Predicted RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	TMEM234	Q8WY98	164 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	MCHR2	Q969V1	340 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	DCBLD2	Q96PD2	775 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	SOX7	Q9BT81	388 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	GPN1	Q9HCN4	374 aa	Predicted RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	PISD	Q9UG56	409 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	ETV7	Q9Y603	341 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	UBE2QL1	A1L167	161 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR2T1	O43869	369 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	CTLA4	P16410	223 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	RGS19	P49795	217 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	SORD	Q00796	357 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	MFGE8	Q08431	387 aa	Predicted RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	EIF2B1	Q14232	305 aa	Known RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	NKPD1	Q17RQ9	610 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	C2orf76	Q3KRA6	126 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	OR51A2	Q8NGJ7	313 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	FAM46B	Q96A09	425 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	SLC41A2	Q96JW4	573 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	C5orf34	Q96MH7	638 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	CENPM	Q9NSP4	180 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	SESN1	Q9Y6P5	492 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	TRAV14DV4	A0A0A6YYC5	116 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	SHISA8	B8ZZ34	492 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	SPDEF	O95238	335 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	ZNF823	P16415	610 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	FBXW4	P57775	412 aa		11.62	□□□□□ -0.55
COL12A1-205	ENST00000425443	FMOD	Q06828	376 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms