RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MKL2Q9ULH7 1088 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 FAM96BQ9Y3D0 163 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 CLDN16Q9Y5I7 305 aa12.83□□□□□ -0.35
MSH5-206ENST00000423982 ZFHX2Q9C0A1 2572 aaPredicted RBP12.83□□□□□ -0.36
MSH5-206ENST00000423982 A0A0B4J2A0 478 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 MELTFP08582 738 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 SLC25A4P12235 298 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 CBX5P45973 191 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 GPR3P46089 330 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 RAB13P51153 203 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 IL13RA1P78552 427 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 SVBPQ8N300 66 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 OR5AP2Q8NGF4 316 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 OR4D6Q8NGJ1 314 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 OR4A4PQ8NGN8 299 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 EDEM2Q9BV94 578 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 SHPKQ9UHJ6 478 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 SEC16AO15027 2179 aa12.83□□□□□ -0.36
MSH5-206ENST00000423982 SPP1P10451 314 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 HPGDP15428 266 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 HOXA1P49639 335 aaPredicted RBP12.82□□□□□ -0.36
MSH5-206ENST00000423982 PNLIPRP2P54317 469 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 SKP2Q13309 424 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 ZNF528Q3MIS6 628 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 H3F3CQ6NXT2 135 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 ZSCAN1Q8NBB4 408 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 LILRB1Q8NHL6 650 aaPredicted RBP12.82□□□□□ -0.36
MSH5-206ENST00000423982 ZNF563Q8TA94 476 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 RRNAD1Q96FB5 475 aaKnown RBP12.82□□□□□ -0.36
MSH5-206ENST00000423982 ARRDC1-AS1Q9H2J1 176 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 FN3KRPQ9HA64 309 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 COA4Q9NYJ1 87 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 KCNK7Q9Y2U2 307 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 MUC6Q6W4X9 2439 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 RIF1Q5UIP0 2472 aaKnown RBP12.82□□□□□ -0.36
MSH5-206ENST00000423982 C9orf170A2RU37 121 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 RHPN2P1A8MT19 583 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 SLC16A7O60669 478 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 GFERP55789 205 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 ADAM8P78325 824 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 VWA2Q5GFL6 755 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 LYG2Q86SG7 212 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 FJX1Q86VR8 437 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 TMEM200AQ86VY9 491 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 ZNF584Q8IVC4 421 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 GTPBP8Q8N3Z3 284 aaPredicted RBP12.82□□□□□ -0.36
MSH5-206ENST00000423982 THAP6Q8TBB0 222 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 ELP5Q8TE02 316 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 TGM7Q96PF1 710 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 SLC19A3Q9BZV2 496 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 OR5K4A6NMS3 321 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 TXNDC12O95881 172 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 GLAP06280 429 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 ERCC1P07992 297 aaPredicted RBP12.82□□□□□ -0.36
MSH5-206ENST00000423982 CD96P40200 585 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 OR1D5P58170 312 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 ARMC6Q6NXE6 501 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 KDM8Q8N371 416 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
MSH5-206ENST00000423982 DGAT2Q96PD7 388 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 SEMA6CQ9H3T2 930 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 ZNF629Q9UEG4 869 aaPredicted RBP12.82□□□□□ -0.36
MSH5-206ENST00000423982 ATPIF1Q9UII2 106 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 CSAG2Q9Y5P2 127 aa12.82□□□□□ -0.36
MSH5-206ENST00000423982 PCDH15Q96QU1 1955 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 CDC14CA4D256 554 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 C5orf51A6NDU8 294 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 C2orf74A8MZ97 194 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 ZNF208O43345 1280 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 CTLA4P16410 223 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 RAB11FIP2Q7L804 512 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 TRAPPC6BQ86SZ2 158 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 ZNF679Q8IYX0 411 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 CHST4Q8NCG5 386 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 SCPEP1Q9HB40 452 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 TREM1Q9NP99 234 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 EMC9Q9Y3B6 208 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 LRP12Q9Y561 859 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 TMEM14AQ9Y6G1 99 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 A0A0J9YY10 115 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 CD74P04233 296 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 CRYBA1P05813 215 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 HRH1P35367 487 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 INSM1Q01101 510 aaPredicted RBP12.81□□□□□ -0.36
MSH5-206ENST00000423982 RNASE10Q5GAN6 216 aaKnown RBP12.81□□□□□ -0.36
MSH5-206ENST00000423982 ADGRE4PQ86SQ3 457 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 OOSP2Q86WS3 158 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 PAQR4Q8N4S7 273 aaPredicted RBP12.81□□□□□ -0.36
MSH5-206ENST00000423982 OR10R2Q8NGX6 335 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 RNF128Q8TEB7 428 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 DCUN1D4Q92564 292 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 NUDT9Q9BW91 350 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 NRSN2Q9GZP1 204 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 CTSFQ9UBX1 484 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 SUSD2Q9UGT4 822 aa12.81□□□□□ -0.36
MSH5-206ENST00000423982 MSGN1A6NI15 193 aa12.8□□□□□ -0.36
MSH5-206ENST00000423982 OR6A2O95222 327 aa12.8□□□□□ -0.36
MSH5-206ENST00000423982 FARS2O95363 451 aaKnown RBP12.8□□□□□ -0.36
MSH5-206ENST00000423982 GIMD1P0DJR0 217 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms