RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 RASD2Q96D21 266 aa11.78□□□□□ -0.52
NFE4-201ENST00000420058 MAGEB18Q96M61 343 aa11.78□□□□□ -0.52
NFE4-201ENST00000420058 ZNF582Q96NG8 517 aaPredicted RBP11.78□□□□□ -0.52
NFE4-201ENST00000420058 SIRPDQ9H106 197 aa11.78□□□□□ -0.52
NFE4-201ENST00000420058 ASH2LQ9UBL3 628 aa11.78□□□□□ -0.52
NFE4-201ENST00000420058 TMCC3Q9ULS5 477 aa11.78□□□□□ -0.52
NFE4-201ENST00000420058 PRSS37A4D1T9 235 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 ENSAO43768 121 aaKnown RBP11.77□□□□□ -0.53
NFE4-201ENST00000420058 CD14P08571 375 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 LSM6P62312 80 aaKnown RBP11.77□□□□□ -0.53
NFE4-201ENST00000420058 ST3GAL3Q11203 375 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 AQP6Q13520 282 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 KRTAP27-1Q3LI81 207 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 ANKDD1AQ495B1 522 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 CYBRD1Q53TN4 286 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 TBPL2Q6SJ96 375 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 OAFQ86UD1 273 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 BHLHE23Q8NDY6 225 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 FAM110DQ8TAY7 271 aaPredicted RBP11.77□□□□□ -0.53
NFE4-201ENST00000420058 STON2Q8WXE9 905 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 UBE2FQ969M7 185 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 WDFY2Q96P53 400 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 WDR76Q9H967 626 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 SMURF1Q9HCE7 757 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 ACOXLQ9NUZ1 547 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 TMEM100Q9NV29 134 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 RHCGQ9UBD6 479 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 COA3Q9Y2R0 106 aaPredicted RBP11.77□□□□□ -0.53
NFE4-201ENST00000420058 COL7A1Q02388 2944 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 TENM3Q9P273 2699 aa11.77□□□□□ -0.53
NFE4-201ENST00000420058 A0A087WUU8 490 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 A0A0U1RQK1 487 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 LRRC30A6NM36 301 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 EFCAB9A8MZ26 197 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 J3KTA2 159 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 AHCYL1O43865 530 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 FAM20BO75063 409 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 PTP4A3O75365 173 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 TOX4O94842 621 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 VIMP08670 466 aaKnown RBP11.76□□□□□ -0.53
NFE4-201ENST00000420058 FPR3P25089 353 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 YAP1P46937 504 aaKnown RBP11.76□□□□□ -0.53
NFE4-201ENST00000420058 RGS6P49758 472 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 KCNMB1Q16558 191 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 BEAN1Q3B7T3 259 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 TTMPQ5BVD1 217 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 LDLRAD3Q86YD5 345 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 C1orf87Q8N0U7 546 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 CELF2-AS1Q8N7Q2 184 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 OR5L1Q8NGL2 311 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 TBC1D15Q8TC07 691 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 GATAD2BQ8WXI9 593 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 APOBEC3DQ96AK3 386 aaPredicted RBP11.76□□□□□ -0.53
NFE4-201ENST00000420058 PRRC1Q96M27 445 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 RASSF4Q9H2L5 321 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 C16orf95Q9H693 158 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 TCF7L1Q9HCS4 588 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 GRHPRQ9UBQ7 328 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 ATPIF1Q9UII2 106 aa11.76□□□□□ -0.53
NFE4-201ENST00000420058 G3V4G9 280 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 SLC16A7O60669 478 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 LIPFP07098 398 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 KDELR2P33947 212 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 CD200P41217 278 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 SLC9A3P48764 834 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
NFE4-201ENST00000420058 COX10Q12887 443 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
NFE4-201ENST00000420058 PRAMEF6Q5VXH4 476 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 TMPRSS11FQ6ZWK6 438 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 NAA40Q86UY6 237 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 ERGIC1Q969X5 290 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 SYT4Q9H2B2 425 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 NMNAT1Q9HAN9 279 aaPredicted RBP11.75□□□□□ -0.53
NFE4-201ENST00000420058 VSX1Q9NZR4 365 aaPredicted RBP11.75□□□□□ -0.53
NFE4-201ENST00000420058 LHFPL6Q9Y693 200 aa11.75□□□□□ -0.53
NFE4-201ENST00000420058 DCTN6O00399 190 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 KHDRBS3O75525 346 aaKnown RBP11.74□□□□□ -0.53
NFE4-201ENST00000420058 PTBP3O95758 552 aaKnown RBP11.74□□□□□ -0.53
NFE4-201ENST00000420058 ANOS1P23352 680 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 NPY4RP50391 375 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 ARF6P62330 175 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 SELENOWP63302 87 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 CYLC2Q14093 348 aaPredicted RBP11.74□□□□□ -0.53
NFE4-201ENST00000420058 GK2Q14410 553 aaPredicted RBP11.74□□□□□ -0.53
NFE4-201ENST00000420058 MEP1BQ16820 701 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 ZBED5Q49AG3 693 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 CD276Q5ZPR3 534 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 SFRP4Q6FHJ7 346 aaPredicted RBP11.74□□□□□ -0.53
NFE4-201ENST00000420058 Q6ZPA2 131 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 PTCHD4Q6ZW05 846 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 TSEN54Q7Z6J9 526 aaKnown RBP11.74□□□□□ -0.53
NFE4-201ENST00000420058 GLB1L2Q8IW92 636 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 RNF113BQ8IZP6 322 aaKnown RBP11.74□□□□□ -0.53
NFE4-201ENST00000420058 OFCC1Q8IZS5 231 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 OR8J3Q8NGG0 315 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 LHX4Q969G2 390 aa11.74□□□□□ -0.53
NFE4-201ENST00000420058 COQ7Q99807 217 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms