RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SPARTQ8N0X7 666 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 SVOPLQ8N434 492 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 LRRC18Q8N456 261 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 PAQR4Q8N4S7 273 aaPredicted RBP5.94□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF525Q8N782 197 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 SLC30A7Q8NEW0 376 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 FANK1Q8TC84 345 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 BCAS4Q8TDM0 211 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 RASD2Q96D21 266 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 SORCS2Q96PQ0 1159 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 RBP7Q96R05 134 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 GPX7Q96SL4 187 aaPredicted RBP5.94□□□□□ -1.46
HMGN1-205ENST00000419378 REG4Q9BYZ8 158 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 MUC13Q9H3R2 512 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 C1orf198Q9H425 327 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 RNF121Q9H920 327 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 GRHPRQ9UBQ7 328 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 IL20RAQ9UHF4 553 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 SLC7A8Q9UHI5 535 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 PRPF19Q9UMS4 504 aaKnown RBP5.94□□□□□ -1.46
HMGN1-205ENST00000419378 AURKCQ9UQB9 309 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 FKBP7Q9Y680 259 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 CR1P17927 2039 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 RTTNQ86VV8 2226 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 HIVEP2P31629 2446 aa5.94□□□□□ -1.46
HMGN1-205ENST00000419378 DNHD1Q96M86 4753 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 SONP18583 2426 aaKnown RBP5.93□□□□□ -1.46
HMGN1-205ENST00000419378 IQCMA0A1B0GVH7 501 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 TMEM129A0AVI4 362 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 PRSS37A4D1T9 235 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 AHCYL1O43865 530 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 OR10H3O60404 316 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 PPP1R3DO95685 299 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 SNAP29O95721 258 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 CST2P09228 141 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 CSF3P09919 207 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 CCL2P13500 99 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 CTLA4P16410 223 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 ZNF32P17041 273 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 MSR1P21757 451 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 LAP3P28838 519 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 MAGEA2P43356 314 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 PPOXP50336 477 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 RPS6KA3P51812 740 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 DSCR9P59020 149 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 MS4A2Q01362 244 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 HSF2Q03933 536 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 KRTAP1-1Q07627 177 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 SGCAQ16586 387 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 TBC1D28Q2M2D7 210 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 PABPC1L2AQ5JQF8 200 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 FAM27BQ5VT28 67 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 GPR139Q6DWJ6 353 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 SFRP4Q6FHJ7 346 aaPredicted RBP5.93□□□□□ -1.46
HMGN1-205ENST00000419378 SMARCD3Q6STE5 483 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 DPY19L2P2Q6ZN68 376 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 TRPM8Q7Z2W7 1104 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 ZER1Q7Z7L7 766 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 ADCK1Q86TW2 530 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 DHFR2Q86XF0 187 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 MAPK1IP1LQ8NDC0 245 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 AKR7LQ8NHP1 331 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 MRPL24Q96A35 216 aaKnown RBP5.93□□□□□ -1.46
HMGN1-205ENST00000419378 CCDC124Q96CT7 223 aaKnown RBP5.93□□□□□ -1.46
HMGN1-205ENST00000419378 ASB9Q96DX5 294 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 DOK1Q99704 481 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 RHNO1Q9BSD3 238 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 MRPL37Q9BZE1 423 aaKnown RBP5.93□□□□□ -1.46
HMGN1-205ENST00000419378 C1orf21Q9H246 121 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 SYT4Q9H2B2 425 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 KCNN2Q9H2S1 579 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 OR51B6Q9H340 312 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 MAGIXQ9H6Y5 334 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 CDH20Q9HBT6 801 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 DYNLRB1Q9NP97 96 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 CCNB1IP1Q9NPC3 277 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 NRIP3Q9NQ35 241 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 POLE4Q9NR33 117 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 TAS2R1Q9NYW7 299 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 FBXO9Q9UK97 447 aaPredicted RBP5.93□□□□□ -1.46
HMGN1-205ENST00000419378 TMCC3Q9ULS5 477 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 CMAHPQ9Y471 501 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 LYVE1Q9Y5Y7 322 aa5.93□□□□□ -1.46
HMGN1-205ENST00000419378 ABCA1O95477 2261 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 A0A096LNT2 108 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 A0A1W2PPW3 197 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 M0R233 179 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 TNFRSF11BO00300 401 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 SOCS2O14508 198 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 IMPA2O14732 288 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 ACOT8O14734 319 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 KRT36O76013 467 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 TXNDC12O95881 172 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 PTHP01270 115 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 IGFBP1P08833 259 aaPredicted RBP5.92□□□□□ -1.46
HMGN1-205ENST00000419378 APEHP13798 732 aaKnown RBP5.92□□□□□ -1.46
HMGN1-205ENST00000419378 SLC25A16P16260 332 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 CCNOP22674 350 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 STOMP27105 288 aa5.92□□□□□ -1.46
HMGN1-205ENST00000419378 SLC6A6P31641 620 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms