RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CRMP1Q14194 572 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 KRTAP27-1Q3LI81 207 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 CD300LDQ6UXZ3 194 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 OR5AS1Q8N127 324 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 OR51L1Q8NGJ5 315 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 OR9Q1Q8NGQ5 310 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 ZNRF4Q8WWF5 429 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 SLC7A6OSQ96CW6 309 aaPredicted RBP13.24□□□□□ -0.29
ITGB1-204ENST00000417122 FEVQ99581 238 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 RBM4Q9BWF3 364 aaKnown RBP13.24□□□□□ -0.29
ITGB1-204ENST00000417122 C1QTNF5Q9BXJ0 243 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 ZNF665Q9H7R5 613 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 LPAR2Q9HBW0 351 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 PNRC2Q9NPJ4 139 aaKnown RBP13.24□□□□□ -0.29
ITGB1-204ENST00000417122 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
ITGB1-204ENST00000417122 TVP23AA6NH52 213 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 IFNGP01579 166 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 MSMBP08118 114 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 ANPEPP15144 967 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 HOXB6P17509 224 aaKnown RBP13.23□□□□□ -0.29
ITGB1-204ENST00000417122 TNFRSF1AP19438 455 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 RPS27P42677 84 aaKnown RBP13.23□□□□□ -0.29
ITGB1-204ENST00000417122 FLOT2Q14254 428 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 OR2T2Q6IF00 324 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 LYPD4Q6UWN0 246 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 COLCA1Q6ZS62 124 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 CXXC5Q7LFL8 322 aaKnown RBP13.23□□□□□ -0.29
ITGB1-204ENST00000417122 PEG10Q86TG7 708 aaKnown RBP13.23□□□□□ -0.29
ITGB1-204ENST00000417122 SPATA24Q86W54 205 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 OR51F2Q8NH61 342 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 TEX47Q8TBZ9 253 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 TMEM186Q96B77 213 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 RAB39BQ96DA2 213 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 MAP6Q96JE9 813 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 IL19Q9UHD0 177 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 DYSFO75923 2080 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 SVEP1Q4LDE5 3571 aa13.23□□□□□ -0.29
ITGB1-204ENST00000417122 ARRDC5A6NEK1 342 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 H3BN98 237 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 SURF4O15260 269 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 DNAJC8O75937 253 aaPredicted RBP13.22□□□□□ -0.29
ITGB1-204ENST00000417122 GYPBP06028 91 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 SPI1P17947 270 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 FMO3P31513 532 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 THBS2P35442 1172 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 SLC25A1P53007 311 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 TPTEP56180 551 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 ACSM5Q6NUN0 579 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 TMEM179BQ7Z7N9 219 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 NAA40Q86UY6 237 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 ATG16L2Q8NAA4 619 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 OR8G5Q8NG78 346 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 OR10S1Q8NGN2 331 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 ITLN1Q8WWA0 313 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 ZNF582Q96NG8 517 aaPredicted RBP13.22□□□□□ -0.29
ITGB1-204ENST00000417122 OR2V2Q96R30 315 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 NMNAT2Q9BZQ4 307 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 WDR76Q9H967 626 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 HIF1ANQ9NWT6 349 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 PDP1Q9P0J1 537 aaPredicted RBP13.22□□□□□ -0.29
ITGB1-204ENST00000417122 POMPQ9Y244 141 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 COMMD3-BMI1R4GMX3 469 aa13.22□□□□□ -0.29
ITGB1-204ENST00000417122 ISPDA4D126 451 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 RIIAD1A6NNX1 92 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 M0R135 149 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 DEAF1O75398 565 aaPredicted RBP13.21□□□□□ -0.29
ITGB1-204ENST00000417122 IGHV2-5P01817 119 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 LCATP04180 440 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 CLUP10909 449 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 PSKH1P11801 424 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 ZNF3P17036 446 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 ENTPD1P49961 510 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 HNRNPA0Q13151 305 aaKnown RBP13.21□□□□□ -0.29
ITGB1-204ENST00000417122 SLC27A4Q6P1M0 643 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 DCXRQ7Z4W1 244 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 ZNF511Q8NB15 262 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 OR13G1Q8NGZ3 307 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 SPTSSAQ969W0 71 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 ZNF799Q96GE5 643 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 GAL3ST1Q99999 423 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 HCAR1Q9BXC0 346 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 YY1AP1Q9H869 796 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 CMC2Q9NRP2 79 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 TMEM106BQ9NUM4 274 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 DCAF16Q9NXF7 216 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 NPTNQ9Y639 398 aa13.21□□□□□ -0.29
ITGB1-204ENST00000417122 TRAV20A0A0B4J274 112 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 TCRBV3S1A0A5B6 114 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 RNF212BA8MTL3 300 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 IQCF6A8MYZ5 107 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 ZNF593O00488 134 aaPredicted RBP13.2□□□□□ -0.3
ITGB1-204ENST00000417122 PHF1O43189 567 aaPredicted RBP13.2□□□□□ -0.3
ITGB1-204ENST00000417122 FKBP6O75344 327 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 E2F6O75461 281 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 SPARCP09486 303 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 SELEP16581 610 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 GRK5P34947 590 aa13.2□□□□□ -0.3
ITGB1-204ENST00000417122 SRP14P37108 136 aaKnown RBP13.2□□□□□ -0.3
ITGB1-204ENST00000417122 BLVRAP53004 296 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms