RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 SLC25A4P12235 298 aa8.77□□□□□ -1
SS18-203ENST00000415083 MGMTP16455 207 aa8.77□□□□□ -1
SS18-203ENST00000415083 GNB3P16520 340 aa8.77□□□□□ -1
SS18-203ENST00000415083 HLA-GP17693 338 aa8.77□□□□□ -1
SS18-203ENST00000415083 RIDAP52758 137 aaKnown RBP8.77□□□□□ -1
SS18-203ENST00000415083 PLCXD2Q0VAA5 305 aa8.77□□□□□ -1
SS18-203ENST00000415083 DMRTC1Q5HYR2 192 aa8.77□□□□□ -1
SS18-203ENST00000415083 PLAC9Q5JTB6 97 aa8.77□□□□□ -1
SS18-203ENST00000415083 PAPD4Q6PIY7 484 aaKnown RBP8.77□□□□□ -1
SS18-203ENST00000415083 OR2W3Q7Z3T1 314 aa8.77□□□□□ -1
SS18-203ENST00000415083 PDZD9Q8IXQ8 264 aa8.77□□□□□ -1
SS18-203ENST00000415083 PXT1Q8NFP0 134 aa8.77□□□□□ -1
SS18-203ENST00000415083 PPP1R1CQ8WVI7 109 aa8.77□□□□□ -1
SS18-203ENST00000415083 FAM46BQ96A09 425 aa8.77□□□□□ -1
SS18-203ENST00000415083 FGGYQ96C11 551 aa8.77□□□□□ -1
SS18-203ENST00000415083 SPACA5Q96QH8 159 aa8.77□□□□□ -1
SS18-203ENST00000415083 EMC6Q9BV81 110 aa8.77□□□□□ -1
SS18-203ENST00000415083 PDE7BQ9NP56 450 aa8.77□□□□□ -1
SS18-203ENST00000415083 KLHL13Q9P2N7 655 aa8.77□□□□□ -1
SS18-203ENST00000415083 C9orf170A2RU37 121 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 MSTNO14793 375 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 EFSO43281 561 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 NUDT14O95848 222 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 MPZP25189 248 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 P2RY4P51582 365 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 FBXW4P57775 412 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 INPP5JQ15735 1006 aaPredicted RBP8.77□□□□□ -1.01
SS18-203ENST00000415083 STK11Q15831 433 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 SCGB2B2Q4G0G5 96 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 SLC38A9Q8NBW4 561 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 TMEM104Q8NE00 496 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 OR10K1Q8NGX5 313 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 NKD1Q969G9 470 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 TMEM230Q96A57 120 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 RNF126Q9BV68 326 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 CHRNA10Q9GZZ6 450 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 IFT46Q9NQC8 304 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 MMACHCQ9Y4U1 282 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 MYO7BQ6PIF6 2116 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 ZNF736B4DX44 427 aaPredicted RBP8.77□□□□□ -1.01
SS18-203ENST00000415083 GP1BBP13224 206 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 C4BPBP20851 252 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 IL12BP29460 328 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 PPIAP62937 165 aaKnown RBP8.77□□□□□ -1.01
SS18-203ENST00000415083 JAGN1Q8N5M9 183 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 APCDD1LQ8NCL9 501 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 RNF133Q8WVZ7 376 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 VRK1Q99986 396 aaPredicted RBP8.77□□□□□ -1.01
SS18-203ENST00000415083 CYTL1Q9NRR1 136 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 MED11Q9P086 117 aa8.77□□□□□ -1.01
SS18-203ENST00000415083 FBXO9Q9UK97 447 aaPredicted RBP8.77□□□□□ -1.01
SS18-203ENST00000415083 EIF1AYO14602 144 aaKnown RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 HLA-AP01891 365 aaKnown RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 BCKDHBP21953 392 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 HRH1P35367 487 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 ACTBP60709 375 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 ACTG1P63261 375 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 NSDHLQ15738 373 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 SMAD2Q15796 467 aaKnown RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 GLT8D1Q68CQ7 371 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 BEST3Q8N1M1 668 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 EDAQ92838 391 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 SLC25A21Q9BQT8 299 aaPredicted RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 PELOQ9BRX2 385 aaKnown RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 ADAT1Q9BUB4 502 aaKnown RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 SCPEP1Q9HB40 452 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 ZNF304Q9HCX3 659 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 ATXN7L1Q9ULK2 861 aaPredicted RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 TMEM269A0A1B0GVZ9 245 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 RAMP1O60894 148 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 GP1BAP07359 652 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 GIMD1P0DJR0 217 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 PGCP20142 388 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 CASRP41180 1078 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 PNLIPRP2P54317 469 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 CLDN6P56747 220 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 ELOCQ15369 112 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 GRINAQ7Z429 371 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 LYG2Q86SG7 212 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 TRAPPC6BQ86SZ2 158 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 OR5AS1Q8N127 324 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 SMRP1Q8NCR6 262 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 MITD1Q8WV92 249 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 C11orf40Q8WZ69 217 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 SLC25A32Q9H2D1 315 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 MTIF3Q9H2K0 278 aaKnown RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 CHRDQ9H2X0 955 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 HHLA2Q9UM44 414 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 RTTNQ86VV8 2226 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 BCL2L11O43521 198 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 PTGDSP41222 190 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 AKR1D1P51857 326 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 TMEM50BP56557 158 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 ZNF345Q14585 488 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 CDNFQ49AH0 187 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 TMEM88Q6PEY1 159 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 OGFOD3Q6PK18 319 aa8.76□□□□□ -1.01
SS18-203ENST00000415083 NFAM1Q8NET5 270 aaPredicted RBP8.76□□□□□ -1.01
SS18-203ENST00000415083 OR1S2Q8NGQ3 325 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms