RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 KIR2DS1A0A191URI9 304 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 A0A1B0GWJ7 208 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 POM121CA8CG34 1229 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 IQCF6A8MYZ5 107 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 HLA-DPB1P04440 258 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 MTNR1AP48039 350 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 SRP9P49458 86 aaKnown RBP20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 GPR139Q6DWJ6 353 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 BTNL3Q6UXE8 466 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 BRD3OSQ6XYD6 125 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 NEIL1Q96FI4 390 aaPredicted RBP20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 ANKRD19PQ9H560 264 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 TMEM5Q9Y2B1 443 aa20.33■□□□□ 0.85
AC005540.1-201ENST00000413911 DOCK11Q5JSL3 2073 aa20.33■□□□□ 0.84
AC005540.1-201ENST00000413911 NCK1P16333 377 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 CPT2P23786 658 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 GSK3BP49841 420 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 SLC7A2P52569 658 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 SRSF4Q08170 494 aaKnown RBP20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 MAB21L1Q13394 359 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 SEC23BQ15437 767 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 ZNF181Q2M3W8 571 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 DEFB112Q30KQ8 113 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 KRTAP27-1Q3LI81 207 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 C8orf82Q6P1X6 216 aaPredicted RBP20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 C16orf87Q6PH81 154 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 COLCA1Q6ZS62 124 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 RRM2BQ7LG56 351 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 FITM2Q8N6M3 262 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 C19orf18Q8NEA5 215 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 OR5L1Q8NGL2 311 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 TMIGD2Q96BF3 282 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 RSRC1Q96IZ7 334 aaKnown RBP20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 COQ7Q99807 217 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 CDADC1Q9BWV3 514 aa20.32■□□□□ 0.84
AC005540.1-201ENST00000413911 IGLV1-36A0A0B4J1U3 117 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 TRBV4-1A0A0J9YWV2 114 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 A0A1W2PRQ8 180 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 HOXA3O43365 443 aaPredicted RBP20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 TXNDC12O95881 172 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 DEFA6Q01524 100 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 DGCR6Q14129 220 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 ZNF841Q6ZN19 808 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 SPATC1Q76KD6 591 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 ARPINQ7Z6K5 226 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 ADCK1Q86TW2 530 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 OR10S1Q8NGN2 331 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 NUDT16L1Q9BRJ7 211 aaKnown RBP20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 SLITRK2Q9H156 845 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 PRDM13Q9H4Q3 707 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 NDUFAF4Q9P032 175 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 RPS6KA6Q9UK32 745 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 POLR1DQ9Y2S0 133 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 AP3M1Q9Y2T2 418 aa20.31■□□□□ 0.84
AC005540.1-201ENST00000413911 GSTA4O15217 222 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 FSTL3O95633 263 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 H1F0P07305 194 aaKnown RBP20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 PITPNBP48739 271 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 PDLIM3Q53GG5 364 aaPredicted RBP20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 DPY19L2P2Q6ZN68 376 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 NAA40Q86UY6 237 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 GJC3Q8NFK1 279 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 OR8B3Q8NGG8 313 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 OR8B2Q96RD0 313 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 HDHD2Q9H0R4 259 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 TMEM100Q9NV29 134 aa20.3■□□□□ 0.84
AC005540.1-201ENST00000413911 C22orf46C9J442 243 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 COX4I1P13073 169 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 FPR3P25089 353 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 GATA4P43694 442 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 CENPAP49450 140 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 FGF12P61328 243 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 COX10Q12887 443 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 FGD3Q5JSP0 725 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 CLEC12AQ5QGZ9 265 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 WDR25Q64LD2 544 aaPredicted RBP20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 CFAP77Q6ZQR2 320 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 CYP4Z1Q86W10 505 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 OR6V1Q8N148 313 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 RP9Q8TA86 221 aaKnown RBP20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 PLEKHA8Q96JA3 519 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 FUZQ9BT04 418 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 NDEL1Q9GZM8 345 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 B9D1Q9UPM9 204 aa20.29■□□□□ 0.84
AC005540.1-201ENST00000413911 PRKDCP78527 4128 aaKnown RBP20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 UNC119BA6NIH7 251 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 SLC22A2O15244 555 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 DIRAS1O95057 198 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 PPP1R3DO95685 299 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 ACSM4P0C7M7 580 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 ANOS1P23352 680 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 RAD23AP54725 363 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 GK2Q14410 553 aaPredicted RBP20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 MPPED2Q15777 294 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 LINC00346Q8IVM7 164 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 FAM86B1Q8N7N1 296 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 SLC26A10Q8NG04 563 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 C7orf34Q96L11 122 aa20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 SRA1Q9HD15 236 aaKnown RBP20.28■□□□□ 0.84
AC005540.1-201ENST00000413911 CLN8Q9UBY8 286 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms