RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 IL1AP01583 271 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 IGHV1-69P01742 117 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 BGLAPP02818 100 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ALDOAP04075 364 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 SSBP05455 408 aaKnown RBP eCLIP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR8U9P0C7N5 309 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PDHBP11177 359 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CRYGAP11844 174 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ETFAP13804 333 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ATF4P18848 351 aaPredicted RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CYP2B6P20813 491 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CD82P27701 267 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CRABP2P29373 138 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 GNPDA1P46926 289 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CYB561P49447 251 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 UBXN2AP68543 259 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CRADDP78560 199 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 RBBP4Q09028 425 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 SELPLGQ14242 412 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC29A2Q14542 456 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLINT1Q14677 625 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 GINS1Q14691 196 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 TATDN3Q17R31 274 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ESRGQ1W209 222 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 KLHL38Q2WGJ6 581 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 MS4A13Q5J8X5 152 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 TPRG1LQ5T0D9 272 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PRAMEF20Q5VT98 475 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CST9LP1Q5W188 147 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC25A24Q6NUK1 477 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 LEG1Q6P5S2 330 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 SCGB1D4Q6XE38 83 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 RTL4Q6ZR62 310 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 C3orf62Q6ZUJ4 267 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 NCCRP1Q6ZVX7 275 aaPredicted RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 USP45Q70EL2 814 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 UBE2R2Q712K3 238 aaPredicted RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 SND1Q7KZF4 910 aaKnown RBP eCLIP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 LHFPL3Q86UP9 236 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 KBTBD6Q86V97 674 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZNF410Q86VK4 478 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 HORMAD1Q86X24 394 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 YIPF7Q8N8F6 280 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 DAND5Q8N907 189 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ASCC1Q8N9N2 400 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 C5orf17Q8NAS9 161 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR4F15Q8NGB8 312 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR10P1Q8NGE3 313 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR2A12Q8NGT7 310 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 SUN5Q8TC36 379 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 TRPC4APQ8TEL6 797 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ABHD3Q8WU67 409 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 RAB2BQ8WUD1 216 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 MAFIPQ8WZ33 124 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 MR1Q95460 341 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 RERGQ96A58 199 aaPredicted RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 AP2M1Q96CW1 435 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 LRRC46Q96FV0 321 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CMTM7Q96FZ5 175 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 FAXDC2Q96IV6 333 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CPB2Q96IY4 423 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 C4orf45Q96LM5 186 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PAFAH2Q99487 392 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 RSG1Q9BU20 258 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 TMEM59Q9BXS4 323 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 MS4A8Q9BY19 250 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 UBA5Q9GZZ9 404 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 VCX3BQ9H321 246 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR52D1Q9H346 318 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ELAC1Q9H777 363 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 BRF2Q9HAW0 419 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CYP3A43Q9HB55 503 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZCCHC17Q9NP64 241 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PALMDQ9NP74 551 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 GPR108Q9NPR9 543 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 ACER3Q9NUN7 267 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 MRPL22Q9NWU5 206 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC39A1Q9NY26 324 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 UTP6Q9NYH9 597 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 UBAP1Q9NZ09 502 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR1A1Q9P1Q5 309 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CGNQ9P2M7 1197 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 CYB5R1Q9UHQ9 305 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 POLR1DQ9Y2S0 133 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PCDHGA5Q9Y5G8 931 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 PCDHGA1Q9Y5H4 931 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 VIRMAQ69YN4 1812 aaKnown RBP-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 MBD5Q9P267 1494 aa-2.2□□□□□ -2.76
RNU4-88P-201ENST00000411220 HELZP42694 1942 aaKnown RBP-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 KIF24Q5T7B8 1368 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 PIK3R4Q99570 1358 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 A0A087WZ39 114 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 TRBV6-8A0A0A6YYG3 113 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 IGHV3-21A0A0B4J1V1 117 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 TRBV6-1A0A0K0K1D8 114 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 TMEM212A6NML5 194 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 C2orf74A8MZ97 194 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 TMEM150CB9EJG8 249 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 NEDD8-MDP1E9PL57 170 aa-2.21□□□□□ -2.76
RNU4-88P-201ENST00000411220 F2Z2F3 143 aa-2.21□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms