RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 AIM2O14862 343 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 LGALS3P17931 250 aaKnown RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 RBM34P42696 430 aaKnown RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 ARFIP1P53367 373 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 GFERP55789 205 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 RPS23P62266 143 aaKnown RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 DMC1Q14565 340 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 ZMYND11Q15326 602 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 PGGHGQ32M88 737 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 ANKDD1AQ495B1 522 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 UBE2UQ5VVX9 321 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 SASS6Q6UVJ0 657 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 LZTS2Q9BRK4 669 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 SLC2A8Q9NY64 477 aa1.74□□□□□ -2.13
PMS1-203ENST00000409593 CSDC2Q9Y534 153 aaKnown RBP1.74□□□□□ -2.13
PMS1-203ENST00000409593 TRIP11Q15643 1979 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 OTOGLQ3ZCN5 2332 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 IGHV3-72A0A0B4J1Y9 119 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 IGKV1-8A0A0C4DH67 115 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 MANBAO00462 879 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 GLSO94925 669 aaPredicted RBP1.73□□□□□ -2.13
PMS1-203ENST00000409593 SERPINA3P01011 423 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 ARG1P05089 322 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 STXBP1P61764 594 aaKnown RBP1.73□□□□□ -2.13
PMS1-203ENST00000409593 STUMQ69YW2 141 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 TMEM107Q6UX40 140 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 C16orf47Q6ZP98 133 aaPredicted RBP1.73□□□□□ -2.13
PMS1-203ENST00000409593 NPWQ8N729 165 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 ZNF645Q8N7E2 425 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 SLC35G3Q8N808 338 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 OR1J4Q8NGS1 313 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 APH1BQ8WW43 257 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 ZFP3Q96NJ6 502 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 CRACR2AQ9BSW2 395 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 TMEM27Q9HBJ8 222 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 RHBDL2Q9NX52 303 aa1.73□□□□□ -2.13
PMS1-203ENST00000409593 A0A1B0GW55 424 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 ZNF878C9JN71 531 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 CHMP2AO43633 222 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 CNMDO75829 334 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 DUX4L2P0CJ85 424 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 DUX4L3P0CJ86 424 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 DUX4L5P0CJ88 424 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 DUX4L6P0CJ89 424 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 DUX4L7P0CJ90 424 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 TALDO1P37837 337 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 SYKP43405 635 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 ACLYP53396 1101 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 PPIDQ08752 370 aaKnown RBP1.72□□□□□ -2.13
PMS1-203ENST00000409593 ZNF266Q14584 549 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 CDR2LQ86X02 465 aaPredicted RBP1.72□□□□□ -2.13
PMS1-203ENST00000409593 C11orf72Q8NBR9 251 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 OR52E2Q8NGJ4 325 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 TM2D3Q9BRN9 247 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 CHCHD7Q9BUK0 85 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 ILKAPQ9H0C8 392 aaPredicted RBP1.72□□□□□ -2.13
PMS1-203ENST00000409593 DUX4Q9UBX2 424 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 PISDQ9UG56 409 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 LGALS13Q9UHV8 139 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 USP47Q96K76 1375 aa1.72□□□□□ -2.13
PMS1-203ENST00000409593 CACNA1DQ01668 2161 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 MYO16Q9Y6X6 1858 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 SMIM26A0A096LP01 95 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 IGHV1-69DA0A0B4J2H0 117 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 SMKR1H3BMG3 65 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 PLPP1O14494 284 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 CXCL11O14625 94 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 PLIN3O60664 434 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 SP4Q02446 784 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 PPP1R7Q15435 360 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 SOHLH1Q5JUK2 328 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 NECAB1Q8N987 351 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 GPR26Q8NDV2 337 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 KCNG3Q8TAE7 436 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 ECHDC3Q96DC8 303 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 COL21A1Q96P44 957 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 C1orf50Q9BV19 199 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 OR51M1Q9H341 326 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 LTBP4Q8N2S1 1624 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 ITGB4P16144 1822 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 OR6C70A6NIJ9 312 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 LHBP01229 141 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 SLC2A3P11169 496 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 ZNF24P17028 368 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 ATF6P18850 670 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 IDH2P48735 452 aaKnown RBP1.71□□□□□ -2.14
PMS1-203ENST00000409593 EIF3EP60228 445 aaKnown RBP1.71□□□□□ -2.14
PMS1-203ENST00000409593 DGCR6Q14129 220 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 ZNF235Q14590 738 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 H3F3CQ6NXT2 135 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 ADM2Q7Z4H4 148 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 CBR4Q8N4T8 237 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 OR9K2Q8NGE7 335 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 OR10G6Q8NH81 332 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 OR51E1Q8TCB6 317 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 NT5C3BQ969T7 300 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 MARVELD1Q9BSK0 173 aa1.71□□□□□ -2.14
PMS1-203ENST00000409593 MYOZ1Q9NP98 299 aaPredicted RBP1.71□□□□□ -2.14
PMS1-203ENST00000409593 PLXNB1O43157 2135 aa1.7□□□□□ -2.14
PMS1-203ENST00000409593 A0A0J9YXV3 536 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms